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Cluster: A171.bin_4_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC A171_contig_113 A171_contig_113_334 378855 380174 + 2.A.40.3.1
STP A171_contig_113 A171_contig_113_335 380174 380746 + Pribosyltran
TC A171_contig_113 A171_contig_113_336 380832 381785 + 8.A.5.1.7
TC A171_contig_113 A171_contig_113_337 381890 383509 - 2.A.14.2.1
TF A171_contig_113 A171_contig_113_338 383681 385207 + Mga
pfam A171_contig_113 A171_contig_113_339 385296 386165 + NAD_binding_2 | F420_oxidored | NAD_binding_11
CAZyme A171_contig_113 A171_contig_113_340 386309 387910 + GT4
CAZyme A171_contig_113 A171_contig_113_341 387922 389436 + GT4
Gene ID: A171_contig_113_334
Type: TC
Location: 378855 - 380174 (+)
Gene ID: A171_contig_113_335
Type: STP
Location: 380174 - 380746 (+)
Gene ID: A171_contig_113_336
Type: TC
Location: 380832 - 381785 (+)
Gene ID: A171_contig_113_337
Type: TC
Location: 381890 - 383509 (-)
Gene ID: A171_contig_113_338
Type: TF
Location: 383681 - 385207 (+)
Gene ID: A171_contig_113_339
Type: pfam
Location: 385296 - 386165 (+)
Gene ID: A171_contig_113_340
Type: CAZyme
Location: 386309 - 387910 (+)
Gene ID: A171_contig_113_341
Type: CAZyme
Location: 387922 - 389436 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota
→
Class
Bacilli
→
Order
Lactobacillales
→
Family
Lactobacillaceae
→
Genus
Weissella
→
Species
Weissella confusa

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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