Cluster: A171.bin_4_CGC21
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 1
- Substrate:
- Genome ID: A171.bin_4
- CGC Family ID: CGCFAM_04339
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | A171_contig_113 | A171_contig_113_1668 | 1768927 | 1769655 | - | 9.B.2.1.18 |
| NULL(UNKNOWN) | A171_contig_113 | A171_contig_113_1669 | 1769648 | 1769860 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | A171_contig_113 | A171_contig_113_1670 | 1769874 | 1770701 | - | S6PP | S6PP | Hydrolase_3 |
| TC | A171_contig_113 | A171_contig_113_1671 | 1770876 | 1771271 | + | 1.A.22.1.3 |
| pfam | A171_contig_113 | A171_contig_113_1672 | 1771489 | 1772055 | + | dNK |
| CAZyme | A171_contig_113 | A171_contig_113_1673 | 1772480 | 1773604 | - | CBM50 |
| pfam | A171_contig_113 | A171_contig_113_1674 | 1773985 | 1775490 | - | FGGY_N | FGGY_C |
| pfam | A171_contig_113 | A171_contig_113_1675 | 1775584 | 1775769 | - | Tautomerase |
| TC | A171_contig_113 | A171_contig_113_1676 | 1775790 | 1776746 | - | 2.A.115.1.1 |
| TC | A171_contig_113 | A171_contig_113_1677 | 1776902 | 1778188 | - | 2.A.23.1.2 |
Gene ID: A171_contig_113_1668
Type: TC
Location: 1768927 - 1769655 (-)
Type: TC
Location: 1768927 - 1769655 (-)
Gene ID: A171_contig_113_1669
Type:
Location: 1769648 - 1769860 (-)
Type:
Location: 1769648 - 1769860 (-)
Gene ID: A171_contig_113_1670
Type: pfam
Location: 1769874 - 1770701 (-)
Type: pfam
Location: 1769874 - 1770701 (-)
Gene ID: A171_contig_113_1671
Type: TC
Location: 1770876 - 1771271 (+)
Type: TC
Location: 1770876 - 1771271 (+)
Gene ID: A171_contig_113_1672
Type: pfam
Location: 1771489 - 1772055 (+)
Type: pfam
Location: 1771489 - 1772055 (+)
Gene ID: A171_contig_113_1673
Type: CAZyme
Location: 1772480 - 1773604 (-)
Type: CAZyme
Location: 1772480 - 1773604 (-)
Gene ID: A171_contig_113_1674
Type: pfam
Location: 1773985 - 1775490 (-)
Type: pfam
Location: 1773985 - 1775490 (-)
Gene ID: A171_contig_113_1675
Type: pfam
Location: 1775584 - 1775769 (-)
Type: pfam
Location: 1775584 - 1775769 (-)
Gene ID: A171_contig_113_1676
Type: TC
Location: 1775790 - 1776746 (-)
Type: TC
Location: 1775790 - 1776746 (-)
Gene ID: A171_contig_113_1677
Type: TC
Location: 1776902 - 1778188 (-)
Type: TC
Location: 1776902 - 1778188 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Weissella
Species
Weissella confusa
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.