CGCs
Total: 123241 Gene Clusters| Cluster ID ↑ | CGC Family | Total Gene Count | CAZyme Gene Count | Substrate | CAZymes | Continent |
|---|---|---|---|---|---|---|
| Rep_460_CGC62 | CGCFAM_00110 | 7 | 4 | pectin host glycan |
GH16
Agarose, Arabinogalactan proteins, Beta-1, 3-glucan, 3-glucan (fungi, algae, plant), 3-1, 4-glucan (laminarin, lichenin and cereal d-glucans), Carrageenan, Chitin, Exopolysaccharides (bacteria), Mucin-type o-glycans, Keratan sulfate (host glycan), Hyaluronate (glycosaminoglycan of host glycan), Porphyran (red algal beta-galactose-sulfate), Xyloglucan (plant), Xyloglucan
GH29
Human milk oligosaccharides, mucin, host glycan
GH2
Galactomannan (fungi), Arabinan, Beta-galactoside, Beta-glucoside, Beta-glucuronoside, Beta-mannoside, Chitosan or chitosan oligosaccharides (nonacetylated chitin), N-glycan (plant), Pectin (rhamnogalacturonan ii), Beta-xyloside
GH20
Capsular polysaccharide (bacteria), Mucin, N-glycan (host glycan, human milk oligosaccharides, chitin), Lacto-n-tetraose (human milk oligosaccharides)
|
NA |
| Rep_460_CGC63 | CGCFAM_10205 | 15 | 8 | — |
GT4
GT2
GH18
Chitooligosaccharides (symbiotic nitrogen-fixing bacteria), Chitin, N-glycan (host glycan), Peptidoglycan
|
NA |
| Rep_460_CGC64 | CGCFAM_01233 | 6 | 2 | — |
CE3
Acetylxylan, Xyloglucan
GH23
Chitin, Peptidoglycan
|
NA |
| Rep_460_CGC65 | CGCFAM_11293 | 5 | 1 | — |
PL33
Gellan(polysaccharide), Hyaluronate(host glycan), Glycosaminoglycans(host glycan)
|
NA |
| Rep_460_CGC66 | — | 4 | 2 | — |
CBM32
Galactose, lactose, lacnac
GH28
Xylogalacturonan (pectin), Galacturonan (pectin), Rhamnogalacturonan (pectin), Pectin (rhamnogalacturonan i)
|
NA |
| Rep_460_CGC67 | CGCFAM_02241 | 6 | 4 | — |
GH146
Arabinan
GH97
Alpha-glucose residue, Alpha-galactoside, alpha-fucoside, Starch
CBM91
Xylan
GH43
Arabinan, arabinoxylan, Beta-1, 3-galactan, arabinogalactan, Beta-galactofuranoside, 3-xylan (algae), Xylan, Arabinoxylan
GH88
Sulfated glycosaminoglycans
|
NA |
| Rep_460_CGC68 | — | 4 | 1 | — |
GH18
Chitooligosaccharides (symbiotic nitrogen-fixing bacteria), Chitin, N-glycan (host glycan), Peptidoglycan
|
NA |
| Rep_460_CGC69 | CGCFAM_03676 | 4 | 1 | — |
GH13
Starch, glycogen, and malto-oligosaccharides, Cyclodextrin (alpha-1, 4 glycosidic glucan from starch degradation), Glycogen, Pullulan (starch degradation by fungi), and alpha-1, 6 glucan, Glucosylglycerate, Maltooligosaccharides, Amylopectin (starch), Cyclomaltodextrins, Maltose, Sucrose, Trehalose
|
NA |
| Rep_460_CGC7 | CGCFAM_01383 | 3 | 1 | — |
GH115
Arabinogalactan, Glucuronoxylan
|
NA |
| Rep_460_CGC70 | — | 4 | 1 | — |
CBM50
Chitin or peptidoglycan
|
NA |
| Rep_460_CGC71 | — | 3 | 1 | — |
GH65
Kojibiose and alpha-1, 2-oligoglucan, Trehalose, kojibiose, Kojibiose, Nigerose, 1, 3-alpha-oligoglucan, Maltose (alpha-1, 4), Glc-alpha-1, 2-gal of collagen (animal), Glucopyranosyl-alpha-1, 3-rhamnose (bacteria lipopolysaccharides or capsule polysaccharides)
|
NA |
| Rep_460_CGC72 | CGCFAM_00111 | 5 | 1 | alpha-glucan |
PL1
Pectin, Homogalacturonan(de-esterified pectin)
|
NA |
| Rep_460_CGC73 | — | 4 | 1 | — |
GH23
Chitin, Peptidoglycan
|
NA |
| Rep_460_CGC74 | CGCFAM_00361 | 4 | 1 | — |
PL1
Pectin, Homogalacturonan(de-esterified pectin)
|
NA |
| Rep_460_CGC75 | — | 20 | 10 | — |
GH2
Galactomannan (fungi), Arabinan, Beta-galactoside, Beta-glucoside, Beta-glucuronoside, Beta-mannoside, Chitosan or chitosan oligosaccharides (nonacetylated chitin), N-glycan (plant), Pectin (rhamnogalacturonan ii), Beta-xyloside
GH27
Alpha-galactoside, galactose oligosaccharides (plant), galactomannans (plant) and galactolipid (animal), Arabinogalactan, Raffinose family oligosaccharide (plant), Human blood group a, mucin, host glycan, Dextran and isomalto-oligosaccharides (bacteria)
GH43
Arabinan, arabinoxylan, Beta-1, 3-galactan, arabinogalactan, Beta-galactofuranoside, 3-xylan (algae), Xylan, Arabinoxylan
GH49
Dextran (branched alpha-glucan), Pullulan (starch degradation by fungi), Sulfated arabinan
CBM91
Xylan
|
NA |
| Rep_460_CGC76 | — | 10 | 6 | — |
CBM6
Amorphous cellulose, beta-1, 4-xylan, Beta-1, 3-glucan, 3-1, 4-glucan, and beta-1
GH49
Dextran (branched alpha-glucan), Pullulan (starch degradation by fungi), Sulfated arabinan
GH43
Arabinan, arabinoxylan, Beta-1, 3-galactan, arabinogalactan, Beta-galactofuranoside, 3-xylan (algae), Xylan, Arabinoxylan
GH2
Galactomannan (fungi), Arabinan, Beta-galactoside, Beta-glucoside, Beta-glucuronoside, Beta-mannoside, Chitosan or chitosan oligosaccharides (nonacetylated chitin), N-glycan (plant), Pectin (rhamnogalacturonan ii), Beta-xyloside
GH120
Xylan
|
NA |
| Rep_460_CGC78 | CGCFAM_00525 | 11 | 5 | — |
GH28
Xylogalacturonan (pectin), Galacturonan (pectin), Rhamnogalacturonan (pectin), Pectin (rhamnogalacturonan i)
CBM67
L-rhamnose
GH33
Sialic acid, Sialic acid (o-glycan, n-glycan, mucin, host glycan), Pectin (rhamnogalacturonan ii), lipopolysaccharides (bacteria)
GH78
Alpha-l-rhamnosidase in polyphenol (naringin, rutin, hesperidin), ulvan, pectin, arabinogalactan-protein, Rhamnogalacturonan
CBM91
Xylan
GH43
Arabinan, arabinoxylan, Beta-1, 3-galactan, arabinogalactan, Beta-galactofuranoside, 3-xylan (algae), Xylan, Arabinoxylan
GH95
Plant pectic polysaccharide, xylan, Alpha1, 2-l-fucosidase sugar, Alpha-l-fucoside
GH140
Pectin (rhamnogalacturonan ii)
|
NA |
| Rep_460_CGC79 | — | 4 | 1 | — |
GT19
|
NA |
| Rep_460_CGC8 | CGCFAM_00016 | 11 | 4 | host glycan |
GH92
Mannosyl-oligosaccharide, Host n-glycan
GH130
Mannooligosaccharides, Beta-mannan
GH18
Chitooligosaccharides (symbiotic nitrogen-fixing bacteria), Chitin, N-glycan (host glycan), Peptidoglycan
|
NA |
| Rep_460_CGC80 | CGCFAM_00934 | 7 | 4 | beta-glucan |
GH5
Arabinan, Arabinogalactan (bacteria), Arabinogalactan, Laminarin (algae), pustulan (fungi), Beta-1, 3-glucans (laminarin), Beta-glucan(contains both (1->3)- and (1->4)-bonds), Lichenin and cereal beta-glucan, Cellulose, beta-glucan, Beta-glycoside, Beta-mannan, Glucomannan, N-glycan, beta-mannan, Mannans, galactomannans and glucomannan, Cellulose and similar substrates, Chitin or peptidoglycan, Chitosan, Sterylglucoside (fungi), Glycosphingolipids, Fungus-specific glucosylceramide (glycolipid), Glycosphingolipid, galactolipids, Hesperidin, Naringenin (flavonoid) and tea aroma, Rutin (polyphenol), Arabinoxylans, Xylan, Xyloglucan
GH3
Arabinan, arabinoxylan, Avenacin, Beta-1, 3-1, 4-glucan (laminarin, lichenin and cereal d-glucans), Beta-glucan, 3-glucan (laminarin, Cellodextrin (beta-1, 3-glucan), Chitin, peptidoglycan, Glycosphingolipid (host glycan), Peptidoglycan, Coniferin (glucoside of coniferyl alcohol), Protodioscin (plant steroidal saponin), Xylan, Xyloglucan (plant)
CE7
Cephalosporin c(antibiotic), Acetylxylan
|
NA |