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Cluster: Rep_460_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_460_c_0 Rep_460_c_0_107 164665 165399 + 3.A.1.147.2
peptidase Rep_460_c_0 Rep_460_c_0_108 165396 165908 + C40.004
peptidase Rep_460_c_0 Rep_460_c_0_109 165939 166823 + G04.UNW
CAZyme Rep_460_c_0 Rep_460_c_0_110 167112 169406 - GH92
CAZyme Rep_460_c_0 Rep_460_c_0_111 169433 170404 - GH130_2
pfam Rep_460_c_0 Rep_460_c_0_112 170431 171741 - MFS_1 | MFS_1
CAZyme Rep_460_c_0 Rep_460_c_0_113 171764 174040 - GH92
pfam Rep_460_c_0 Rep_460_c_0_114 174264 175439 - BT_3987-like_N | Laminin_G_3
CAZyme Rep_460_c_0 Rep_460_c_0_115 175460 176629 - GH18
TC Rep_460_c_0 Rep_460_c_0_116 176658 178289 - 8.A.46.2.2
TC Rep_460_c_0 Rep_460_c_0_117 178295 181573 - 1.B.14.6.13
Gene ID: Rep_460_c_0_107
Type: TC
Location: 164665 - 165399 (+)
Gene ID: Rep_460_c_0_108
Type: peptidase
Location: 165396 - 165908 (+)
Gene ID: Rep_460_c_0_109
Type: peptidase
Location: 165939 - 166823 (+)
Gene ID: Rep_460_c_0_110
Type: CAZyme
Location: 167112 - 169406 (-)
Gene ID: Rep_460_c_0_111
Type: CAZyme
Location: 169433 - 170404 (-)
Gene ID: Rep_460_c_0_112
Type: pfam
Location: 170431 - 171741 (-)
Gene ID: Rep_460_c_0_113
Type: CAZyme
Location: 171764 - 174040 (-)
Gene ID: Rep_460_c_0_114
Type: pfam
Location: 174264 - 175439 (-)
Gene ID: Rep_460_c_0_115
Type: CAZyme
Location: 175460 - 176629 (-)
Gene ID: Rep_460_c_0_116
Type: TC
Location: 176658 - 178289 (-)
Gene ID: Rep_460_c_0_117
Type: TC
Location: 178295 - 181573 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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