Cluster: Rep_460_CGC66
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_460
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_460_c_23 | Rep_460_c_23_17 | 20613 | 21863 | + | CBM32 |
| TC | Rep_460_c_23 | Rep_460_c_23_18 | 21899 | 25192 | + | 1.B.14.6.1 |
| pfam | Rep_460_c_23 | Rep_460_c_23_19 | 25215 | 27242 | + | SusD_RagB | SusD-like_3 |
| CAZyme | Rep_460_c_23 | Rep_460_c_23_20 | 27402 | 28832 | + | GH28 |
Gene ID: Rep_460_c_23_17
Type: CAZyme
Location: 20613 - 21863 (+)
Type: CAZyme
Location: 20613 - 21863 (+)
Gene ID: Rep_460_c_23_18
Type: TC
Location: 21899 - 25192 (+)
Type: TC
Location: 21899 - 25192 (+)
Gene ID: Rep_460_c_23_19
Type: pfam
Location: 25215 - 27242 (+)
Type: pfam
Location: 25215 - 27242 (+)
Gene ID: Rep_460_c_23_20
Type: CAZyme
Location: 27402 - 28832 (+)
Type: CAZyme
Location: 27402 - 28832 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides stercorirosoris
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_460_c_23_20 | vegetarian > omnivore | 1.30912 | 0.00207 |