Cluster: Rep_460_CGC75
🧬 Cluster Details
- Gene Count: 20
- CAZyme Count: 10
- Substrate:
- Genome ID: Rep_460
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_460_c_28 | Rep_460_c_28_3 | 1674 | 3113 | - | GH27 |
| CAZyme | Rep_460_c_28 | Rep_460_c_28_4 | 3244 | 4659 | - | GH49 |
| CAZyme | Rep_460_c_28 | Rep_460_c_28_5 | 4694 | 5677 | - | GH43 |
| CAZyme | Rep_460_c_28 | Rep_460_c_28_6 | 5692 | 7209 | - | GH43_2 |
| sulfatase | Rep_460_c_28 | Rep_460_c_28_7 | 7271 | 8866 | - | S1_20 |
| CAZyme | Rep_460_c_28 | Rep_460_c_28_8 | 8853 | 10514 | - | CBM91 | GH43_12 |
| sulfatase | Rep_460_c_28 | Rep_460_c_28_9 | 10514 | 11920 | - | S1_8 |
| CAZyme | Rep_460_c_28 | Rep_460_c_28_10 | 11933 | 13777 | - | GH2 |
| TF | Rep_460_c_28 | Rep_460_c_28_11 | 14495 | 18757 | + | HTH_AraC |
| CAZyme | Rep_460_c_28 | Rep_460_c_28_12 | 18822 | 20099 | - | GH27 |
| sulfatase | Rep_460_c_28 | Rep_460_c_28_13 | 20466 | 21947 | + | S1_20 |
| NULL(UNKNOWN) | Rep_460_c_28 | Rep_460_c_28_14 | 21967 | 23205 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_460_c_28 | Rep_460_c_28_15 | 23225 | 25021 | + | 2.A.21.3.2 |
| CAZyme | Rep_460_c_28 | Rep_460_c_28_16 | 25042 | 26088 | + | GH43_17 |
| sulfatase | Rep_460_c_28 | Rep_460_c_28_17 | 26324 | 27910 | + | S1_8 |
| sulfatase | Rep_460_c_28 | Rep_460_c_28_18 | 27936 | 29462 | + | S1_7 |
| CAZyme | Rep_460_c_28 | Rep_460_c_28_19 | 29610 | 30746 | + | GH43 |
| TC | Rep_460_c_28 | Rep_460_c_28_20 | 30781 | 33801 | + | 1.B.14.6.1 |
| pfam | Rep_460_c_28 | Rep_460_c_28_21 | 33823 | 35457 | + | SusD_RagB | SusD-like_3 |
| CAZyme | Rep_460_c_28 | Rep_460_c_28_22 | 35485 | 36564 | + | GH43 |
Gene ID: Rep_460_c_28_3
Type: CAZyme
Location: 1674 - 3113 (-)
Type: CAZyme
Location: 1674 - 3113 (-)
Gene ID: Rep_460_c_28_4
Type: CAZyme
Location: 3244 - 4659 (-)
Type: CAZyme
Location: 3244 - 4659 (-)
Gene ID: Rep_460_c_28_5
Type: CAZyme
Location: 4694 - 5677 (-)
Type: CAZyme
Location: 4694 - 5677 (-)
Gene ID: Rep_460_c_28_6
Type: CAZyme
Location: 5692 - 7209 (-)
Type: CAZyme
Location: 5692 - 7209 (-)
Gene ID: Rep_460_c_28_7
Type: sulfatase
Location: 7271 - 8866 (-)
Type: sulfatase
Location: 7271 - 8866 (-)
Gene ID: Rep_460_c_28_8
Type: CAZyme
Location: 8853 - 10514 (-)
Type: CAZyme
Location: 8853 - 10514 (-)
Gene ID: Rep_460_c_28_9
Type: sulfatase
Location: 10514 - 11920 (-)
Type: sulfatase
Location: 10514 - 11920 (-)
Gene ID: Rep_460_c_28_10
Type: CAZyme
Location: 11933 - 13777 (-)
Type: CAZyme
Location: 11933 - 13777 (-)
Gene ID: Rep_460_c_28_11
Type: TF
Location: 14495 - 18757 (+)
Type: TF
Location: 14495 - 18757 (+)
Gene ID: Rep_460_c_28_12
Type: CAZyme
Location: 18822 - 20099 (-)
Type: CAZyme
Location: 18822 - 20099 (-)
Gene ID: Rep_460_c_28_13
Type: sulfatase
Location: 20466 - 21947 (+)
Type: sulfatase
Location: 20466 - 21947 (+)
Gene ID: Rep_460_c_28_14
Type:
Location: 21967 - 23205 (+)
Type:
Location: 21967 - 23205 (+)
Gene ID: Rep_460_c_28_15
Type: TC
Location: 23225 - 25021 (+)
Type: TC
Location: 23225 - 25021 (+)
Gene ID: Rep_460_c_28_16
Type: CAZyme
Location: 25042 - 26088 (+)
Type: CAZyme
Location: 25042 - 26088 (+)
Gene ID: Rep_460_c_28_17
Type: sulfatase
Location: 26324 - 27910 (+)
Type: sulfatase
Location: 26324 - 27910 (+)
Gene ID: Rep_460_c_28_18
Type: sulfatase
Location: 27936 - 29462 (+)
Type: sulfatase
Location: 27936 - 29462 (+)
Gene ID: Rep_460_c_28_19
Type: CAZyme
Location: 29610 - 30746 (+)
Type: CAZyme
Location: 29610 - 30746 (+)
Gene ID: Rep_460_c_28_20
Type: TC
Location: 30781 - 33801 (+)
Type: TC
Location: 30781 - 33801 (+)
Gene ID: Rep_460_c_28_21
Type: pfam
Location: 33823 - 35457 (+)
Type: pfam
Location: 33823 - 35457 (+)
Gene ID: Rep_460_c_28_22
Type: CAZyme
Location: 35485 - 36564 (+)
Type: CAZyme
Location: 35485 - 36564 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides stercorirosoris
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.