dbCAN Logo

PROTEIN: Rep_460_c_28_14

Loading protein structure...

Protein File & Metadata
Download PDB File
Source:
Rep_460_c_28_14.pdb
Genome ID:
Rep_460
Protein ID:
Rep_460_c_28_14

Loading protein structure information...

Detailed structural information will appear here after analysis...

Protein Sequence 
MSKKIVFLML   LAGGCFLSSC   TVTGQPEELR   KRVADRDYPS   AFMAWYNIDH   PDYPVGTEEE 60
RIAACAKHDL   MWEEPLSQLG   EGVDLVLGLV   WDNKHHGLAT   SFTPESLERA   RTNKKLLLEK 120
TPRMICLFEI   RWRDAPMSFL   PPDSDWWLRD   SQGGIRKGWL   GGWEPFYLLD   YTNEELLDNI 180
ARQARIAVEC   GVYDGIMLDW   SGNLEVIKRI   RAAIGEEKLI   IVNIHDDIED   GMAYKDYING 240
AFMELNPIDT   LSLPVEGLKL   HAKEDVNKRR   WEKIEQALQY   YEANFREPRV   NCLEVWGNRD 300
DLRRMRAATC   LGLTMSDGYV   LYADPNPLPT   PDHLHDWYPL   WDVPLGKPLQ   RGECRPDGAW 360
TREFEGGTVV   YNPYGNQTVR   VEFEREMKSS   ITGKSGRSFA   VDGRDGDIFI   AD 412
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q10427-F1-model_v4 26 412 13 473 0.6129 0.714
AF-O13996-F1-model_v4 25 412 16 485 0.6057 0.712
AF-C1H7M3-F1-model_v4 13 412 4 492 0.5876 0.6937
AF-O14154-F1-model_v4 18 412 18 491 0.5876 0.692
AF-Q9Y7S9-F1-model_v4 5 412 1 489 0.5854 0.6965
AF-A0A0D2G691-F1-model_v4 31 412 3 488 0.5822 0.7036
AF-A0A1C1CPP7-F1-model_v4 31 412 3 488 0.5811 0.7019
AF-P07191-F1-model_v4 29 412 24 565 0.5787 0.7256
AF-A1Z7F2-F1-model_v4 29 412 35 596 0.57 0.7293
AF-O74922-F1-model_v4 2 412 1 487 0.5687 0.6982
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A5C5Y9P7 GH27 12 412 18 866 0.6632 0.9277
AF-A0A0X8G8E3-F1-model_v4 GH13 1 412 10 452 0.6582 0.709
AF-A0A1N7I2W7-F1-model_v4 GH13 1 412 3 449 0.6545 0.7043
AF-A0A5Q0GZL7-F1-model_v4 GH0 33 412 51 426 0.6537 0.7414
E5VAC7 GH13 2 411 6 441 0.6537 0.7007
AF-A0A4Y1VHG8-F1-model_v4 GH13 12 411 4 428 0.6514 0.7035
AF-A0A3G6PJ44-F1-model_v4 GH13 1 411 3 449 0.6493 0.7008
AF-A0A3G8Y4R6-F1-model_v4 GH13 1 412 2 447 0.6491 0.6966
AF-A0A1T3ERL7-F1-model_v4 GH13 22 411 1 427 0.6451 0.7121
AF-A0A4P6RJC6-F1-model_v4 GH13 1 412 5 441 0.6444 0.6888
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A5C5Y9P7 GH27 12 412 18 866 0.6632 0.9277
A0A8J2V362 GH168 18 412 17 384 0.6558 0.7237
E5VAC7 GH13 2 411 6 441 0.6537 0.7007
A0A354DAL7 GH13 1 411 9 443 0.6413 0.6885
A0A068NS94 GH13 16 411 5 425 0.6391 0.6942
A0A518HSC2 GH168 29 412 43 394 0.6358 0.7381
A0A5B9MB72 GH168 25 412 38 397 0.6347 0.7285
A0A402CUG8 GH13 40 411 1 416 0.6277 0.714
A0A1B1SC40 GH13 28 412 44 481 0.6267 0.7348
BCP64303.1 GH13 25 412 1 428 0.626 0.7013
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
6sav-assembly2.cif.gz_B 26 412 1 438 0.6321 0.71
6sav-assembly1.cif.gz_A 26 412 1 438 0.6321 0.7104
6sau-assembly1.cif.gz_A 26 411 1 441 0.6287 0.7103
6sao-assembly1.cif.gz_A 26 412 1 438 0.628 0.7056
4gkl-assembly1.cif.gz_A 30 412 1 418 0.6215 0.6926
4gkl-assembly2.cif.gz_B 30 412 1 417 0.6212 0.6907
4e2o-assembly1.cif.gz_A 31 412 1 442 0.612 0.7007
5a2c-assembly1.cif.gz_A 31 412 1 450 0.612 0.7034
3vm7-assembly1.cif.gz_A 24 412 1 469 0.6105 0.7027
6xsj-assembly1.cif.gz_A 26 412 1 475 0.6057 0.7054
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q10427-F1-model_v4 26 412 13 473 0.6129 0.714
AF-P0C1B4-F1-model_v4 15 412 11 496 0.6069 0.7022
AF-O13996-F1-model_v4 25 412 16 485 0.6057 0.712
AF-Q08806-F1-model_v4 1 412 2 507 0.6018 0.6816
AF-P56271-F1-model_v4 26 412 1 475 0.6006 0.7039
AF-P19269-F1-model_v4 7 412 16 501 0.5965 0.6876
AF-O14154-F1-model_v4 18 412 18 491 0.5876 0.692
AF-Q9Y7S9-F1-model_v4 5 412 1 489 0.5854 0.6965
AF-P07191-F1-model_v4 29 412 24 565 0.5787 0.7256
AF-P14898-F1-model_v4 26 412 124 560 0.5726 0.7097
Download Full SwissProt Results