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Cluster: Rep_460_CGC76

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_460_c_28 Rep_460_c_28_28 44109 46307 - CBM6
CAZyme Rep_460_c_28 Rep_460_c_28_29 46304 49513 - GH49
CAZyme Rep_460_c_28 Rep_460_c_28_30 49535 52015 - GH43
CAZyme Rep_460_c_28 Rep_460_c_28_31 52025 54589 - GH43
sulfatase Rep_460_c_28 Rep_460_c_28_32 54589 55986 - S1_8
CAZyme Rep_460_c_28 Rep_460_c_28_33 56003 58930 - GH2
TC Rep_460_c_28 Rep_460_c_28_34 59036 61336 - 2.A.21.9.2
sulfatase Rep_460_c_28 Rep_460_c_28_35 61900 63666 + S1_7
CAZyme Rep_460_c_28 Rep_460_c_28_36 63691 65652 + GH120
TC Rep_460_c_28 Rep_460_c_28_37 65795 68989 + 1.B.14.6.1
Gene ID: Rep_460_c_28_28
Type: CAZyme
Location: 44109 - 46307 (-)
Gene ID: Rep_460_c_28_29
Type: CAZyme
Location: 46304 - 49513 (-)
Gene ID: Rep_460_c_28_30
Type: CAZyme
Location: 49535 - 52015 (-)
Gene ID: Rep_460_c_28_31
Type: CAZyme
Location: 52025 - 54589 (-)
Gene ID: Rep_460_c_28_32
Type: sulfatase
Location: 54589 - 55986 (-)
Gene ID: Rep_460_c_28_33
Type: CAZyme
Location: 56003 - 58930 (-)
Gene ID: Rep_460_c_28_34
Type: TC
Location: 59036 - 61336 (-)
Gene ID: Rep_460_c_28_35
Type: sulfatase
Location: 61900 - 63666 (+)
Gene ID: Rep_460_c_28_36
Type: CAZyme
Location: 63691 - 65652 (+)
Gene ID: Rep_460_c_28_37
Type: TC
Location: 65795 - 68989 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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