Cluster: Rep_460_CGC63
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 8
- Substrate:
- Genome ID: Rep_460
- CGC Family ID: CGCFAM_10205
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_460_c_20 | Rep_460_c_20_29 | 37985 | 39172 | + | GT4 |
| CAZyme | Rep_460_c_20 | Rep_460_c_20_30 | 39221 | 40195 | + | GT2 |
| CAZyme | Rep_460_c_20 | Rep_460_c_20_31 | 40258 | 41487 | + | GT4 |
| pfam | Rep_460_c_20 | Rep_460_c_20_32 | 41624 | 42784 | + | Glyco_tran_WbsX |
| NULL(UNKNOWN) | Rep_460_c_20 | Rep_460_c_20_33 | 42821 | 44041 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_460_c_20 | Rep_460_c_20_34 | 44072 | 45046 | + | GT2 |
| NULL(UNKNOWN) | Rep_460_c_20 | Rep_460_c_20_35 | 45046 | 46362 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_460_c_20 | Rep_460_c_20_36 | 46376 | 47611 | + | GT4 |
| NULL(UNKNOWN) | Rep_460_c_20 | Rep_460_c_20_37 | 47615 | 48718 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_460_c_20 | Rep_460_c_20_38 | 48715 | 49842 | + | GT4 |
| STP | Rep_460_c_20 | Rep_460_c_20_39 | 49882 | 50175 | + | NTP_transf_2 |
| pfam | Rep_460_c_20 | Rep_460_c_20_40 | 50168 | 50536 | + | HepT-like |
| CAZyme | Rep_460_c_20 | Rep_460_c_20_41 | 50754 | 51836 | + | GT4 |
| CAZyme | Rep_460_c_20 | Rep_460_c_20_42 | 51894 | 53606 | - | GH18 |
| TC | Rep_460_c_20 | Rep_460_c_20_43 | 53635 | 54897 | - | 2.A.1.7.11 |
Gene ID: Rep_460_c_20_29
Type: CAZyme
Location: 37985 - 39172 (+)
Type: CAZyme
Location: 37985 - 39172 (+)
Gene ID: Rep_460_c_20_30
Type: CAZyme
Location: 39221 - 40195 (+)
Type: CAZyme
Location: 39221 - 40195 (+)
Gene ID: Rep_460_c_20_31
Type: CAZyme
Location: 40258 - 41487 (+)
Type: CAZyme
Location: 40258 - 41487 (+)
Gene ID: Rep_460_c_20_32
Type: pfam
Location: 41624 - 42784 (+)
Type: pfam
Location: 41624 - 42784 (+)
Gene ID: Rep_460_c_20_33
Type:
Location: 42821 - 44041 (+)
Type:
Location: 42821 - 44041 (+)
Gene ID: Rep_460_c_20_34
Type: CAZyme
Location: 44072 - 45046 (+)
Type: CAZyme
Location: 44072 - 45046 (+)
Gene ID: Rep_460_c_20_35
Type:
Location: 45046 - 46362 (+)
Type:
Location: 45046 - 46362 (+)
Gene ID: Rep_460_c_20_36
Type: CAZyme
Location: 46376 - 47611 (+)
Type: CAZyme
Location: 46376 - 47611 (+)
Gene ID: Rep_460_c_20_37
Type:
Location: 47615 - 48718 (+)
Type:
Location: 47615 - 48718 (+)
Gene ID: Rep_460_c_20_38
Type: CAZyme
Location: 48715 - 49842 (+)
Type: CAZyme
Location: 48715 - 49842 (+)
Gene ID: Rep_460_c_20_39
Type: STP
Location: 49882 - 50175 (+)
Type: STP
Location: 49882 - 50175 (+)
Gene ID: Rep_460_c_20_40
Type: pfam
Location: 50168 - 50536 (+)
Type: pfam
Location: 50168 - 50536 (+)
Gene ID: Rep_460_c_20_41
Type: CAZyme
Location: 50754 - 51836 (+)
Type: CAZyme
Location: 50754 - 51836 (+)
Gene ID: Rep_460_c_20_42
Type: CAZyme
Location: 51894 - 53606 (-)
Type: CAZyme
Location: 51894 - 53606 (-)
Gene ID: Rep_460_c_20_43
Type: TC
Location: 53635 - 54897 (-)
Type: TC
Location: 53635 - 54897 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides stercorirosoris
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.