dbCAN Logo

PROTEIN: Rep_460_c_20_37

Loading protein structure...

Protein File & Metadata
Download PDB File
Source:
Rep_460_c_20_37.pdb
Genome ID:
Rep_460
Protein ID:
Rep_460_c_20_37

Loading protein structure information...

Detailed structural information will appear here after analysis...

Protein Sequence 
MQVDSILERF   LIKGTGKHLY   RFSNADNKTW   LMPAHNMQVA   MNLYQPSARN   GKMVKMLFPW 60
LHRLPFVPKV   IHARSVYYDI   NDELKRLFYQ   LFHEAEIDFS   IFCGTPCVHQ   KITMQISKDK 120
RILGYCKVTD   SKNIATLFKS   EAHILKELGR   KGLKETPVCM   FCGETKDGIK   LFVQSTVKTR 180
NSQVVHKWTA   LHEDFLDRLY   KSTHQLIAFE   QSDYYRTLTD   LQLHIEWLPQ   EADATLVTAA 240
INRILLQHEK   QKVDFSVYHA   DFTPWNMFME   NRQLFVFDWE   YAQLTYPPKL   DKYHFFTQTA 300
YFEKHWNVSQ   IIEYINSENG   KWIDREMYSL   YLLEIISRFT   IREKGNISRE   MAESFRIWIA 360
LLKYLQE 367
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-K0F1R0-F1-model_v4 2 366 5 311 0.6401 0.7225
AF-A0A175W4U2-F1-model_v4 1 367 1 327 0.637 0.7024
AF-Q5F561-F1-model_v4 1 367 1 305 0.6349 0.7142
AF-P29364-F1-model_v4 2 367 1 307 0.6319 0.7181
AF-Q7CQN8-F1-model_v4 10 367 1 286 0.6259 0.7215
AF-K0EWA2-F1-model_v4 24 367 17 323 0.6234 0.7183
AF-P77739-F1-model_v4 10 367 1 286 0.6231 0.7186
AF-A0A0H3GPK7-F1-model_v4 10 367 1 290 0.619 0.7102
AF-B2RYN1-F1-model_v4 10 367 1 309 0.6048 0.6734
AF-A0A0H3GLH3-F1-model_v4 9 367 9 274 0.6042 0.7309
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
QZY29804.1 GT4 1 367 13 396 0.5948 0.8226
BDG09638.1 GT4 2 367 2 715 0.5663 0.7562
A0A1W1I9F4 GT4 12 367 1 365 0.5092 0.8353
AF-A0A3G1KWY5-F1-model_v4 GH18 1 367 5 343 0.4397 0.6143
AF-G7WAY9-F1-model_v4 GT4 1 367 7 361 0.4167 0.6098
QZT62303.1 GT2 23 367 285 805 0.4055 0.712
AF-I4A850-F1-model_v4 GT4 1 367 7 359 0.4034 0.6106
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
QZY29804.1 GT4 1 367 13 396 0.5948 0.8226
BDG09638.1 GT4 2 367 2 715 0.5663 0.7562
A0A1W1I9F4 GT4 12 367 1 365 0.5092 0.8353
A0A3G1KWY5 GH18 1 367 5 343 0.4397 0.6143
QZT62303.1 GT2 23 367 285 805 0.4055 0.712
I4A850 GT4 1 367 7 359 0.4034 0.6106
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
3tyk-assembly1.cif.gz_A 7 367 1 295 0.6525 0.7443
3w0r-assembly1.cif.gz_A 8 367 1 293 0.6504 0.7446
3w0p-assembly1.cif.gz_A 8 367 1 293 0.65 0.7445
3w0m-assembly1.cif.gz_A 10 367 1 292 0.6472 0.7406
1nd4-assembly1.cif.gz_B 9 342 1 255 0.6026 0.7278
3mes-assembly1.cif.gz_A 11 367 1 349 0.6005 0.6425
3mes-assembly1.cif.gz_B 11 367 1 350 0.6005 0.6416
4feu-assembly3.cif.gz_C 24 342 1 262 0.5988 0.7159
4n57-assembly1.cif.gz_A 1 363 1 296 0.5924 0.6777
4gkh-assembly17.cif.gz_I 82 338 12 266 0.5768 0.7108
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A1VMB2-F1-model_v4 1 367 1 314 0.647 0.7196
AF-A4G1V8-F1-model_v4 1 367 1 314 0.6377 0.7157
AF-A6SUR4-F1-model_v4 1 367 1 311 0.636 0.7192
AF-B4R8T4-F1-model_v4 1 367 1 313 0.6358 0.7162
AF-Q4W557-F1-model_v4 1 367 1 305 0.6356 0.7148
AF-A9HS91-F1-model_v4 1 367 1 315 0.6352 0.7104
AF-Q82UL3-F1-model_v4 1 367 1 306 0.6345 0.7218
AF-Q2YBJ8-F1-model_v4 2 367 1 309 0.634 0.7155
AF-B7V732-F1-model_v4 1 367 1 307 0.6338 0.72
AF-Q9JWE5-F1-model_v4 1 367 1 305 0.6336 0.7127
Download Full SwissProt Results