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Basic Information | |
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Species | Fragaria vesca |
Cazyme ID | mrna09404.1-v1.0-hybrid |
Family | AA1 |
Protein Properties | Length: 977 Molecular Weight: 107865 Isoelectric Point: 8.3279 |
Chromosome | Chromosome/Scaffold: 5 Start: 10164528 End: 10170197 |
Description | laccase 1 |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA1 | 27 | 579 | 0 |
TTRRFEFNVEWKNVTRLCHKKPLLTVNGEYPGPTIAVHEGDNVEIKVTNRIAQNTTIHWHGIRQIRTGWADGPAYITQCPIREGKTYTYKFTVIDQRGTL WWHAHHSWQRASVYGAFIIHPRTPYPFSVPIQDEFPIIFGEWWNGDIDSVESEMMKYGGGPAISNAYTINGLPGPFYNCSNKDTLIKTVEHGKTYMLRII NAALNDELFFAVANHTLTVVEIDAVYTKPFKTKAIMIAPGQTTNVLLTANQVPDSSGMFLMVAWTYLTSVFPFNNSTTAGFLQYKNLMSTEHTSQHPNKV TTFDPVMYNFPQMEDTKYYTKFSDNLRSLHSPRYPCNVPKTIHKRIVAVISLNLQDCPANKTCKGYANKRFFASMNNQSFVRPALSILESHYKKLKTSQY STDFPEKPRKPFDYTGVDPLTENMNTEFGTKIMQVPYGTNLEIVLQGTSFLNVENHPIHVHGHNFFIVGKGFGNFDVSKDPAKYNLVDPPERNTVAVPSG GWAAIRIKADNPGVWFIHCHLEEHTSWGLASGFIVQNGHGPSESLLPPPKDLP |
Full Sequence |
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Protein Sequence Length: 977 Download |
MKAFCQLVLL VTLLIISGVL PSCVSQTTRR FEFNVEWKNV TRLCHKKPLL TVNGEYPGPT 60 IAVHEGDNVE IKVTNRIAQN TTIHWHGIRQ IRTGWADGPA YITQCPIREG KTYTYKFTVI 120 DQRGTLWWHA HHSWQRASVY GAFIIHPRTP YPFSVPIQDE FPIIFGEWWN GDIDSVESEM 180 MKYGGGPAIS NAYTINGLPG PFYNCSNKDT LIKTVEHGKT YMLRIINAAL NDELFFAVAN 240 HTLTVVEIDA VYTKPFKTKA IMIAPGQTTN VLLTANQVPD SSGMFLMVAW TYLTSVFPFN 300 NSTTAGFLQY KNLMSTEHTS QHPNKVTTFD PVMYNFPQME DTKYYTKFSD NLRSLHSPRY 360 PCNVPKTIHK RIVAVISLNL QDCPANKTCK GYANKRFFAS MNNQSFVRPA LSILESHYKK 420 LKTSQYSTDF PEKPRKPFDY TGVDPLTENM NTEFGTKIMQ VPYGTNLEIV LQGTSFLNVE 480 NHPIHVHGHN FFIVGKGFGN FDVSKDPAKY NLVDPPERNT VAVPSGGWAA IRIKADNPGV 540 WFIHCHLEEH TSWGLASGFI VQNGHGPSES LLPPPKDLPS SKPVPTLPSF YLTFICSNTP 600 HTSPPSLLLQ PSSFHTLTHP PLPLTHIAEN PKSKLNKPTM SPNPPPLFPF LCLLFTLLPS 660 SLALTNPDPA AVQPFLPKSS PPATIPAFPE QSDIAGCPLQ LPDELFHGVK AACSAKKGDP 720 AGHLQHSRCC PVLAAWLYSA YSATALGRSG RVGPAVTGHG SNTTTAYDPP LLPDDSETCV 780 QDLGKALSAK GIELMRPNET CDMVYCNCGI RLHPLSCPEA FSVNQNGKLI GDKSVKKLEK 840 NCLSSSNNVN NFPGLGGCSK CLNSLKLLNK KKTSNSSKLE DRTTKMHNKD CQLMGLTWLL 900 AKNRTAYMHT VTSVFRAIMV SNDGSDPQSC TLNSDGMPLA VDSSEISDQS PSNILAVSFT 960 FCVVSLSLLY VQLTMS* 1020 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07732 | Cu-oxidase_3 | 2.0e-54 | 34 | 150 | 119 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. | ||
PLN02191 | PLN02191 | 1.0e-79 | 13 | 560 | 577 | + L-ascorbate oxidase | ||
PLN02604 | PLN02604 | 3.0e-81 | 8 | 559 | 584 | + oxidoreductase | ||
TIGR03388 | ascorbase | 7.0e-97 | 28 | 555 | 563 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
TIGR03389 | laccase | 0 | 28 | 566 | 541 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. |
Gene Ontology | |
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GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 0 | 29 | 571 | 4 | 536 | A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12 |
PDB | 1asq_A | 0 | 29 | 571 | 4 | 536 | A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12 |
PDB | 1asp_B | 0 | 29 | 571 | 4 | 536 | A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12 |
PDB | 1asp_A | 0 | 29 | 571 | 4 | 536 | A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12 |
PDB | 1aso_B | 0 | 29 | 571 | 4 | 536 | A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12 |