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Basic Information | |
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Species | Brassica rapa |
Cazyme ID | Bra017010 |
Family | AA1 |
Protein Properties | Length: 521 Molecular Weight: 57615.6 Isoelectric Point: 8.1674 |
Chromosome | Chromosome/Scaffold: 04 Start: 17155933 End: 17158218 |
Description | laccase 5 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA1 | 26 | 503 | 0 |
NRAHHHEFIVRHGVRQMRTGWADGPEFVTQCPIRPGSSYTYRFTIQGQEGTLWWHAHSSWLRATVYGSLLILPPAGSSYPFPNPHRNVPLLLGEWWDGNP VDVLREAIRTGAAPNISDAYTINGQPGDLYKCSSQDTTIVPINVGETILLRVINAALNQPLFFTVANHKFTVVGADASYLKPFTTNAIVLGPGQTTDVLI TGDQPPNHYYMAARAYQSAQNAPFGNTTTTAILQYKSAPCCGGAKPIMPLLPAYNDTNTATRFSQSFRSLKRAEFPTELDENLFITIGLGLNNCPKNFRS RRCQGPNGTRFTASMNNVSFALPSNYSLLQAHHHAIPGVFTTDFPARPPVKFDYTGSNISRSLYQPVRGTKLYKLKYGSRVQIVLQDTGIVTPENHPIHL HGYDFYIVAEGFGNFNPKKDTAKFNLENPPLRNTVGVPVNGWAVIRFVADNPGVWIMHCHLDAHISWGLAMAFLVENG |
Full Sequence |
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Protein Sequence Length: 521 Download |
MEIIKSFFCF ISFAVLLLFT SMAEANRAHH HEFIVRHGVR QMRTGWADGP EFVTQCPIRP 60 GSSYTYRFTI QGQEGTLWWH AHSSWLRATV YGSLLILPPA GSSYPFPNPH RNVPLLLGEW 120 WDGNPVDVLR EAIRTGAAPN ISDAYTINGQ PGDLYKCSSQ DTTIVPINVG ETILLRVINA 180 ALNQPLFFTV ANHKFTVVGA DASYLKPFTT NAIVLGPGQT TDVLITGDQP PNHYYMAARA 240 YQSAQNAPFG NTTTTAILQY KSAPCCGGAK PIMPLLPAYN DTNTATRFSQ SFRSLKRAEF 300 PTELDENLFI TIGLGLNNCP KNFRSRRCQG PNGTRFTASM NNVSFALPSN YSLLQAHHHA 360 IPGVFTTDFP ARPPVKFDYT GSNISRSLYQ PVRGTKLYKL KYGSRVQIVL QDTGIVTPEN 420 HPIHLHGYDF YIVAEGFGNF NPKKDTAKFN LENPPLRNTV GVPVNGWAVI RFVADNPGVW 480 IMHCHLDAHI SWGLAMAFLV ENGNGLLETM EEPPADLPVC * 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07731 | Cu-oxidase_2 | 4.0e-44 | 368 | 504 | 141 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. | ||
PLN02191 | PLN02191 | 1.0e-57 | 37 | 498 | 489 | + L-ascorbate oxidase | ||
PLN02604 | PLN02604 | 3.0e-63 | 37 | 498 | 499 | + oxidoreductase | ||
TIGR03388 | ascorbase | 3.0e-71 | 37 | 498 | 497 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
TIGR03389 | laccase | 0 | 26 | 520 | 499 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. |
Gene Ontology | |
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GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK92474.1 | 0 | 26 | 520 | 55 | 550 | unknown [Populus trichocarpa] |
RefSeq | NP_181568.1 | 0 | 1 | 520 | 1 | 580 | LAC5 (laccase 5); laccase [Arabidopsis thaliana] |
RefSeq | XP_002312186.1 | 0 | 25 | 520 | 78 | 574 | laccase 90a [Populus trichocarpa] |
RefSeq | XP_002315131.1 | 0 | 1 | 520 | 1 | 575 | laccase 90c [Populus trichocarpa] |
RefSeq | XP_002520796.1 | 0 | 26 | 520 | 81 | 577 | laccase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 0 | 26 | 498 | 50 | 521 | A Chain A, Crystal Structure Of Nasturtium Xyloglucan Hydrolase Isoform Nxg2 |
PDB | 1asq_A | 0 | 26 | 498 | 50 | 521 | A Chain A, Crystal Structure Of Nasturtium Xyloglucan Hydrolase Isoform Nxg2 |
PDB | 1asp_B | 0 | 26 | 498 | 50 | 521 | A Chain A, Crystal Structure Of Nasturtium Xyloglucan Hydrolase Isoform Nxg2 |
PDB | 1asp_A | 0 | 26 | 498 | 50 | 521 | A Chain A, Crystal Structure Of Nasturtium Xyloglucan Hydrolase Isoform Nxg2 |
PDB | 1aso_B | 0 | 26 | 498 | 50 | 521 | A Chain A, Crystal Structure Of Nasturtium Xyloglucan Hydrolase Isoform Nxg2 |