y
Basic Information | |
---|---|
Species | Linum usitatissimum |
Cazyme ID | Lus10017427 |
Family | AA1 |
Protein Properties | Length: 580 Molecular Weight: 63651.4 Isoelectric Point: 6.1098 |
Chromosome | Chromosome/Scaffold: 511 Start: 570722 End: 573304 |
Description | laccase 5 |
View CDS |
External Links |
---|
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
AA1 | 32 | 562 | 0 |
AKTHSHDFVVQSTKVKRLCNTHNPITVNGMFPGPTLEVNNGDTVVVNVVNRIKHNLTIHWHGVRQMRTGWADGPEFVTQCPIRPGSSYTYRFTIEGQEGT LWWHAHSTWLRATVYGAMVIYPKEGSTYPFPKPRRQTPILLGEWWDANPIDVLREAIRSGGAPNISDAYTINGQPGDLYNCSSKETAIVPIDVGETNLLR VINAALNQPLFFAIGGHPFTVVGADASYVKPFTTSVIMLGPGQTTDVLISGNQLPNRYYMAATAYQSALNAPFDNTTATAVLEYKSAPCPASKGISGKPV MPMLPKFNDTATVTAFSTSFRSLGKVDNLPKEIDEDLFVTVGLGLNDCPPYYDSARCQGPNGTRFTSSMNNVSFVLPQTTSLLQAYQQGIPEVYTTDFPV QPPVTFDYTGDVDRAMWQPITGTKVYRLKFGSRVQVVLQDTSIVTPENHPIHLHGYDFYVIAEGFGNFDPDVDTAKFNLVDPPMRNTVAVPSNGWAVIRF LADNPGMWIMHCHLDVHIAWGLAMAFLVEEG |
Full Sequence |
---|
Protein Sequence Length: 580 Download |
MVDAGRARGI CYSFFLSIGL VLLLVAASLA SAKTHSHDFV VQSTKVKRLC NTHNPITVNG 60 MFPGPTLEVN NGDTVVVNVV NRIKHNLTIH WHGVRQMRTG WADGPEFVTQ CPIRPGSSYT 120 YRFTIEGQEG TLWWHAHSTW LRATVYGAMV IYPKEGSTYP FPKPRRQTPI LLGEWWDANP 180 IDVLREAIRS GGAPNISDAY TINGQPGDLY NCSSKETAIV PIDVGETNLL RVINAALNQP 240 LFFAIGGHPF TVVGADASYV KPFTTSVIML GPGQTTDVLI SGNQLPNRYY MAATAYQSAL 300 NAPFDNTTAT AVLEYKSAPC PASKGISGKP VMPMLPKFND TATVTAFSTS FRSLGKVDNL 360 PKEIDEDLFV TVGLGLNDCP PYYDSARCQG PNGTRFTSSM NNVSFVLPQT TSLLQAYQQG 420 IPEVYTTDFP VQPPVTFDYT GDVDRAMWQP ITGTKVYRLK FGSRVQVVLQ DTSIVTPENH 480 PIHLHGYDFY VIAEGFGNFD PDVDTAKFNL VDPPMRNTVA VPSNGWAVIR FLADNPGMWI 540 MHCHLDVHIA WGLAMAFLVE EGDEAMQTLE APPLDYPIC* 600 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07731 | Cu-oxidase_2 | 6.0e-45 | 428 | 563 | 141 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. | ||
PLN02191 | PLN02191 | 1.0e-69 | 50 | 557 | 545 | + L-ascorbate oxidase | ||
PLN02604 | PLN02604 | 6.0e-75 | 56 | 569 | 542 | + oxidoreductase | ||
TIGR03388 | ascorbase | 2.0e-89 | 50 | 562 | 544 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
TIGR03389 | laccase | 0 | 33 | 579 | 550 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK92474.1 | 0 | 28 | 579 | 2 | 550 | unknown [Populus trichocarpa] |
EMBL | CBI25418.1 | 0 | 26 | 579 | 25 | 577 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002312186.1 | 0 | 32 | 579 | 30 | 574 | laccase 90a [Populus trichocarpa] |
RefSeq | XP_002315131.1 | 0 | 13 | 579 | 14 | 575 | laccase 90c [Populus trichocarpa] |
RefSeq | XP_002520796.1 | 0 | 31 | 579 | 31 | 577 | laccase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 0 | 50 | 566 | 19 | 528 | A Chain A, The Structure Of Alpha-N-Acetylgalactosaminidase |
PDB | 1asq_A | 0 | 50 | 566 | 19 | 528 | A Chain A, The Structure Of Alpha-N-Acetylgalactosaminidase |
PDB | 1asp_B | 0 | 50 | 566 | 19 | 528 | A Chain A, The Structure Of Alpha-N-Acetylgalactosaminidase |
PDB | 1asp_A | 0 | 50 | 566 | 19 | 528 | A Chain A, The Structure Of Alpha-N-Acetylgalactosaminidase |
PDB | 1aso_B | 0 | 50 | 566 | 19 | 528 | A Chain A, The Structure Of Alpha-N-Acetylgalactosaminidase |