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Basic Information | |
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Species | Capsella rubella |
Cazyme ID | Carubv10022891m |
Family | AA1 |
Protein Properties | Length: 580 Molecular Weight: 63954.9 Isoelectric Point: 8.7595 |
Chromosome | Chromosome/Scaffold: 4 Start: 12006568 End: 12009139 |
Description | laccase 5 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA1 | 29 | 562 | 0 |
KAHHHEFIIQATKVKRLCETHNSITVNGMFPGPTLVVNNGDTLVVKVINRARYNVTIHWHGVRQMRTGWADGPEFVTQCPIRPGSSYTYRFTIQGQEGTL WWHAHSSWLRATVYGSLLVLPPAGSSYPFTNPHRNVPLLLGEWWDANPVDVLRESIRTGGAPNNSDAYTINGQPGDFYKCSSQDTTIVPINVGETILLRV INSALNQPLFFTVANHKLTVVGADASYLKPFTTNVIVLGPGQTTDVLITGDQPPNRYYMAARAYQSAQNAPFGNTTTTAILQYKSAPCCGGGSAKKGISV KPIMPLLPAYNDTNTVTRFSQSFRSLRRAEVPTEIDENLFITIGLGLNNCPKNFRSRRCQGPNGTRFTASMNNVSFALPSNYSLLQAHHHGIPGVFTTDF PAKPPVKFDYTGNNISRSLYQPDRGTKLYKLKYGSTVQIVLQDTGIVTPENHPIHLHGYDFYIVAEGFGNFNPKKDTAKFNLEDPPLRNTVSVPVNGWAV IRFVADNPGVWIMHCHLDAHISWGLAMAFLVENG |
Full Sequence |
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Protein Sequence Length: 580 Download |
MEIAKSLICF ISFAVVLLFT TSMAEAHVKA HHHEFIIQAT KVKRLCETHN SITVNGMFPG 60 PTLVVNNGDT LVVKVINRAR YNVTIHWHGV RQMRTGWADG PEFVTQCPIR PGSSYTYRFT 120 IQGQEGTLWW HAHSSWLRAT VYGSLLVLPP AGSSYPFTNP HRNVPLLLGE WWDANPVDVL 180 RESIRTGGAP NNSDAYTING QPGDFYKCSS QDTTIVPINV GETILLRVIN SALNQPLFFT 240 VANHKLTVVG ADASYLKPFT TNVIVLGPGQ TTDVLITGDQ PPNRYYMAAR AYQSAQNAPF 300 GNTTTTAILQ YKSAPCCGGG SAKKGISVKP IMPLLPAYND TNTVTRFSQS FRSLRRAEVP 360 TEIDENLFIT IGLGLNNCPK NFRSRRCQGP NGTRFTASMN NVSFALPSNY SLLQAHHHGI 420 PGVFTTDFPA KPPVKFDYTG NNISRSLYQP DRGTKLYKLK YGSTVQIVLQ DTGIVTPENH 480 PIHLHGYDFY IVAEGFGNFN PKKDTAKFNL EDPPLRNTVS VPVNGWAVIR FVADNPGVWI 540 MHCHLDAHIS WGLAMAFLVE NGNGVLQTME QPPPDLPVC* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07732 | Cu-oxidase_3 | 5.0e-52 | 37 | 152 | 118 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. | ||
PLN02191 | PLN02191 | 1.0e-72 | 10 | 557 | 575 | + L-ascorbate oxidase | ||
PLN02604 | PLN02604 | 9.0e-78 | 7 | 557 | 587 | + oxidoreductase | ||
TIGR03388 | ascorbase | 4.0e-92 | 46 | 557 | 551 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
TIGR03389 | laccase | 0 | 29 | 579 | 555 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. |
Gene Ontology | |
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GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK92474.1 | 0 | 23 | 579 | 1 | 550 | unknown [Populus trichocarpa] |
RefSeq | NP_181568.1 | 0 | 1 | 579 | 1 | 580 | LAC5 (laccase 5); laccase [Arabidopsis thaliana] |
RefSeq | XP_002312186.1 | 0 | 29 | 579 | 31 | 574 | laccase 90a [Populus trichocarpa] |
RefSeq | XP_002315131.1 | 0 | 1 | 579 | 1 | 575 | laccase 90c [Populus trichocarpa] |
RefSeq | XP_002520796.1 | 0 | 27 | 579 | 31 | 577 | laccase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 0 | 29 | 557 | 2 | 521 | A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human Pdk1 Complex 2 |
PDB | 1asq_A | 0 | 29 | 557 | 2 | 521 | A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human Pdk1 Complex 2 |
PDB | 1asp_B | 0 | 29 | 557 | 2 | 521 | A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human Pdk1 Complex 2 |
PDB | 1asp_A | 0 | 29 | 557 | 2 | 521 | A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human Pdk1 Complex 2 |
PDB | 1aso_B | 0 | 29 | 557 | 2 | 521 | A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human Pdk1 Complex 2 |