y
Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.010G194300.1 |
Family | AA1 |
Protein Properties | Length: 569 Molecular Weight: 63188.1 Isoelectric Point: 9.318 |
Chromosome | Chromosome/Scaffold: 10 Start: 55270470 End: 55273013 |
Description | laccase 5 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA1 | 22 | 556 | 0 |
AEVQRHRFVIQATKVKRLCKTHNTITVNGMFPGPTLEIKNGDTLEVQVVNKARYNVTIHWHGVRQMRTGWADGPEFVTQCPIRPGGSYTYRFTVQGQEGT LWWHAHSSWLRATVYGALIIRPREGKSYPFPKPKRETPILLGEWWDANPIDVVREATRTGAAPNVSDAYTINAQPGDLYKCSSKETTVVSVDSGETNLLR VINAALNQPLFFKVANHKLTVVGADASYTKPFTTSVLMLGPGQTTDVLIRGDQPPSRYYMAARAYQSAQNAPFDNTTTTAILEYKSASCAAKKCNAPTPI MPSLPAYNDTNTVTAFSQSFRSREKAEVPTDIDESLFFTIGLGLNNCPPNFRKRRCQGPNGTRFTASMNNVSFVLPRNFSLLQAHQQGIPGVFTTDFPAN PPLKFDYTGNVSRSLFQPVPGTKLYKLKYGSRVQIVLQDTSIVTPENHPIHLHGYDFYIIAEGFGNFDPKRDTSKFNLVDPPMRNTVGVPVNGWAVIRFV ADNPGVWIMHCHLDVHINWGLAMAFLVDNGVGELQ |
Full Sequence |
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Protein Sequence Length: 569 Download |
MGVFNKFSFI FLVIFLSLSA NAEVQRHRFV IQATKVKRLC KTHNTITVNG MFPGPTLEIK 60 NGDTLEVQVV NKARYNVTIH WHGVRQMRTG WADGPEFVTQ CPIRPGGSYT YRFTVQGQEG 120 TLWWHAHSSW LRATVYGALI IRPREGKSYP FPKPKRETPI LLGEWWDANP IDVVREATRT 180 GAAPNVSDAY TINAQPGDLY KCSSKETTVV SVDSGETNLL RVINAALNQP LFFKVANHKL 240 TVVGADASYT KPFTTSVLML GPGQTTDVLI RGDQPPSRYY MAARAYQSAQ NAPFDNTTTT 300 AILEYKSASC AAKKCNAPTP IMPSLPAYND TNTVTAFSQS FRSREKAEVP TDIDESLFFT 360 IGLGLNNCPP NFRKRRCQGP NGTRFTASMN NVSFVLPRNF SLLQAHQQGI PGVFTTDFPA 420 NPPLKFDYTG NVSRSLFQPV PGTKLYKLKY GSRVQIVLQD TSIVTPENHP IHLHGYDFYI 480 IAEGFGNFDP KRDTSKFNLV DPPMRNTVGV PVNGWAVIRF VADNPGVWIM HCHLDVHINW 540 GLAMAFLVDN GVGELQTIQP PPPDLPIC* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07732 | Cu-oxidase_3 | 8.0e-54 | 30 | 146 | 119 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. | ||
PLN02191 | PLN02191 | 7.0e-70 | 40 | 546 | 540 | + L-ascorbate oxidase | ||
PLN02604 | PLN02604 | 7.0e-81 | 20 | 546 | 563 | + oxidoreductase | ||
TIGR03388 | ascorbase | 5.0e-92 | 40 | 546 | 540 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
TIGR03389 | laccase | 0 | 22 | 568 | 552 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. |
Gene Ontology | |
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GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK92474.1 | 0 | 20 | 568 | 4 | 550 | unknown [Populus trichocarpa] |
EMBL | CBI25418.1 | 0 | 22 | 568 | 31 | 577 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002273875.1 | 0 | 22 | 568 | 31 | 576 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002312186.1 | 0 | 22 | 568 | 30 | 574 | laccase 90a [Populus trichocarpa] |
RefSeq | XP_002315131.1 | 0 | 8 | 568 | 14 | 575 | laccase 90c [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 0 | 22 | 546 | 1 | 521 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1asq_A | 0 | 22 | 546 | 1 | 521 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1asp_B | 0 | 22 | 546 | 1 | 521 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1asp_A | 0 | 22 | 546 | 1 | 521 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1aso_B | 0 | 22 | 546 | 1 | 521 | A Chain A, Pectin Methylesterase From Carrot |