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Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.008G126500.1 |
Family | AA1 |
Protein Properties | Length: 573 Molecular Weight: 63720 Isoelectric Point: 7.3777 |
Chromosome | Chromosome/Scaffold: 08 Start: 36744425 End: 36746679 |
Description | laccase 6 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA1 | 34 | 559 | 0 |
TRFYDFKVQTMKVNKLCNTKEIVTINKMFPGPIVYAQEDDRIIVKVTNETPYNATIHWHGVRQKLSCWFDGPSYITQCPIQAGASFTYEFTLVQQKGTFF WHAHVSWLRATVYGAIVVYPKTEVPYPFEHPYEEHIVILGEYWLRDVVQLEREVLASGGAAPPADAFTINSHPGPNYNCSRNDVYKIDVVPGKTYLLRLI NAGLNMENFFAIAYHKLTIVEADAEYTKPFTTDRVMLGPGQTMNVLVTANQPIGKYSMAMGPYMSAQNISFQNISAIAYFQYSGAVPNSISLPAKLPSFN DNLAAKTVMDGLRSLNPVNVPKEIDTELFVTVGLNVNKCRSKTPRNDCRGMNNGTFAASMNNISFVMPTVSILEAYYKKIGGQFTVDFPGAPLRFYDFVN GAPNNAPNNTQAINGTRTKVLKFGSKVQLIFQDTSTVTTENHPIHLHGYSFYVVGYGTGNYNPQTANFNLIDPPYMNTIGVPVGGWAAIRFVADNPGVWF MHCHLEIHQSWGLGAVLIVENGEGEL |
Full Sequence |
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Protein Sequence Length: 573 Download |
MSLMANLLCF SVLFLTMSFS YCCMAHKWPA GGSTRFYDFK VQTMKVNKLC NTKEIVTINK 60 MFPGPIVYAQ EDDRIIVKVT NETPYNATIH WHGVRQKLSC WFDGPSYITQ CPIQAGASFT 120 YEFTLVQQKG TFFWHAHVSW LRATVYGAIV VYPKTEVPYP FEHPYEEHIV ILGEYWLRDV 180 VQLEREVLAS GGAAPPADAF TINSHPGPNY NCSRNDVYKI DVVPGKTYLL RLINAGLNME 240 NFFAIAYHKL TIVEADAEYT KPFTTDRVML GPGQTMNVLV TANQPIGKYS MAMGPYMSAQ 300 NISFQNISAI AYFQYSGAVP NSISLPAKLP SFNDNLAAKT VMDGLRSLNP VNVPKEIDTE 360 LFVTVGLNVN KCRSKTPRND CRGMNNGTFA ASMNNISFVM PTVSILEAYY KKIGGQFTVD 420 FPGAPLRFYD FVNGAPNNAP NNTQAINGTR TKVLKFGSKV QLIFQDTSTV TTENHPIHLH 480 GYSFYVVGYG TGNYNPQTAN FNLIDPPYMN TIGVPVGGWA AIRFVADNPG VWFMHCHLEI 540 HQSWGLGAVL IVENGEGELE TLPHPPADLP RC* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
TIGR03388 | ascorbase | 0.005 | 523 | 562 | 40 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
PLN02191 | PLN02191 | 5.0e-67 | 30 | 551 | 559 | + L-ascorbate oxidase | ||
PLN02604 | PLN02604 | 3.0e-81 | 4 | 563 | 600 | + oxidoreductase | ||
TIGR03388 | ascorbase | 2.0e-82 | 34 | 549 | 554 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
TIGR03389 | laccase | 0 | 32 | 572 | 547 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. |
Gene Ontology | |
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GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN75876.1 | 0 | 4 | 572 | 1 | 571 | hypothetical protein [Vitis vinifera] |
RefSeq | NP_182180.1 | 0 | 31 | 572 | 28 | 569 | LAC6 (laccase 6); laccase [Arabidopsis thaliana] |
RefSeq | XP_002264410.1 | 0 | 4 | 572 | 1 | 571 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002320207.1 | 0 | 44 | 572 | 1 | 529 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002523314.1 | 0 | 28 | 572 | 28 | 572 | laccase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 0 | 35 | 550 | 4 | 521 | A Chain A, The Crystal Structure Of A Hyperthermoactive Exopolygalacturonase From Thermotoga Maritima |
PDB | 1asq_A | 0 | 35 | 550 | 4 | 521 | A Chain A, The Crystal Structure Of A Hyperthermoactive Exopolygalacturonase From Thermotoga Maritima |
PDB | 1asp_B | 0 | 35 | 550 | 4 | 521 | A Chain A, The Crystal Structure Of A Hyperthermoactive Exopolygalacturonase From Thermotoga Maritima |