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Basic Information | |
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Species | Brassica rapa |
Cazyme ID | Bra034852 |
Family | AA1 |
Protein Properties | Length: 561 Molecular Weight: 61816.7 Isoelectric Point: 8.3797 |
Chromosome | Chromosome/Scaffold: 05 Start: 21723030 End: 21725416 |
Description | Laccase/Diphenol oxidase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA1 | 22 | 547 | 0 |
ANIRHYKFNVVMKNMTKLCSTKPIVTINGKFPGPTLYAREDDNVIVNLTNSVSYNVTIHWHGVKQLRTGWSDGPAYITQCPVQPGGNFIYNFTLTGQRGT LLWHAHISWLRATVHGAIVILPKRGVPYPFPRPHTDKVIVFGEWWKSDVEDVIKQSTQSGLPPNLSDAHTINGLTGPITGCNNSHGYTIHVETGKSYLLR IINAAVNDELFFKIAQHNLTVVEVDASYTKPYNTETLFLGPGQTANAVLTANHPTGNFLMTISPFMDTVVPVDNATATAFLRYKNTTTTDSLTMSNTPPI NATSIAQNFSDSLRSLNSLKYPTNVPLKIDHSLFFAIGVGVNPCATCINGTKTIADINNVTFVMPAMALLQAHYFNKSQGVFTNDFPGRPLTPFDYTGGN NSIPLSNLQTKNGTQVYRLEFNATVQIVIQGTSVIAPESHPTHLHGSNFFVVGKGLGNFDPLMDPKKFNLVDPVERNTVSVPTAGWTAIRFIADNPGVWF FHCHLEVHTSWGLKMAFLVEDGKYSN |
Full Sequence |
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Protein Sequence Length: 561 Download |
MTYSCARIFL LVFLSLLYLA EANIRHYKFN VVMKNMTKLC STKPIVTING KFPGPTLYAR 60 EDDNVIVNLT NSVSYNVTIH WHGVKQLRTG WSDGPAYITQ CPVQPGGNFI YNFTLTGQRG 120 TLLWHAHISW LRATVHGAIV ILPKRGVPYP FPRPHTDKVI VFGEWWKSDV EDVIKQSTQS 180 GLPPNLSDAH TINGLTGPIT GCNNSHGYTI HVETGKSYLL RIINAAVNDE LFFKIAQHNL 240 TVVEVDASYT KPYNTETLFL GPGQTANAVL TANHPTGNFL MTISPFMDTV VPVDNATATA 300 FLRYKNTTTT DSLTMSNTPP INATSIAQNF SDSLRSLNSL KYPTNVPLKI DHSLFFAIGV 360 GVNPCATCIN GTKTIADINN VTFVMPAMAL LQAHYFNKSQ GVFTNDFPGR PLTPFDYTGG 420 NNSIPLSNLQ TKNGTQVYRL EFNATVQIVI QGTSVIAPES HPTHLHGSNF FVVGKGLGNF 480 DPLMDPKKFN LVDPVERNTV SVPTAGWTAI RFIADNPGVW FFHCHLEVHT SWGLKMAFLV 540 EDGKYSNEKL PPPPSDLPKC * 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07732 | Cu-oxidase_3 | 2.0e-48 | 30 | 146 | 119 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. | ||
PLN02191 | PLN02191 | 4.0e-68 | 20 | 550 | 566 | + L-ascorbate oxidase | ||
PLN02604 | PLN02604 | 6.0e-90 | 20 | 551 | 561 | + oxidoreductase | ||
TIGR03388 | ascorbase | 2.0e-94 | 24 | 552 | 563 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
TIGR03389 | laccase | 0 | 22 | 560 | 543 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. |
Gene Ontology | |
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GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAA74103.1 | 0 | 1 | 560 | 1 | 555 | laccase [Populus trichocarpa] |
EMBL | CAC14719.1 | 0 | 1 | 560 | 1 | 555 | laccase [Populus trichocarpa] |
RefSeq | XP_002265173.1 | 0 | 9 | 560 | 8 | 553 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002311202.1 | 0 | 3 | 560 | 4 | 556 | laccase [Populus trichocarpa] |
RefSeq | XP_002316233.1 | 0 | 1 | 560 | 1 | 555 | laccase 3 [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 0 | 22 | 538 | 1 | 521 | A Chain A, Crystal Structure Of The Glycosyltransferase Babsha Bound With Udp And L-Malate |
PDB | 1asq_A | 0 | 22 | 538 | 1 | 521 | A Chain A, Crystal Structure Of The Glycosyltransferase Babsha Bound With Udp And L-Malate |
PDB | 1asp_B | 0 | 22 | 538 | 1 | 521 | A Chain A, Crystal Structure Of The Glycosyltransferase Babsha Bound With Udp And L-Malate |