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Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.010G183600.2 |
Family | AA1 |
Protein Properties | Length: 481 Molecular Weight: 52968.2 Isoelectric Point: 8.0079 |
Chromosome | Chromosome/Scaffold: 10 Start: 18084123 End: 18086310 |
Description | laccase 5 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA1 | 1 | 466 | 0 |
MRTGWADGPEFVTQCPIRPGGSYTYRFNIEGQEGTLWWHAHSSWLRATVYGALIIHPREGSSYPFAKPKRETPILLGEWWDANPVDVVREATRTGAAPNI SDAYTINGQPGDLYNCSSEDTTIVPIASGETNLLRVINAALNQPLFFTIANHKFTVIGADASYLKPFTTSVIMLGPGQTTDVLISGDQLPGRYYMAARAY QSAQNAPFDNTTTTAILEYKSALCPAKCTTKPVMPRLPAYNDTATVTAFSGSLRSPRKVEVPTDIDENLFFTIGLGLNNCPKNSRARRCQGPNGTRFTAS MNNVSFVFPSNIALLQAYQQKVPGIYTTDFPAKPPVKFDYTGNVSRSLFQPVRGTKLYKLKYGSRVQIVLQDTSIVTPENHPIHLHGYDFYIIAEGFGNF NPKTHKSKFNLVDPPMRNTVAVPSNGWAVIRFVADNPGVWLMHCHLDVHITWGLAMAFLVEDGIGE |
Full Sequence |
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Protein Sequence Length: 481 Download |
MRTGWADGPE FVTQCPIRPG GSYTYRFNIE GQEGTLWWHA HSSWLRATVY GALIIHPREG 60 SSYPFAKPKR ETPILLGEWW DANPVDVVRE ATRTGAAPNI SDAYTINGQP GDLYNCSSED 120 TTIVPIASGE TNLLRVINAA LNQPLFFTIA NHKFTVIGAD ASYLKPFTTS VIMLGPGQTT 180 DVLISGDQLP GRYYMAARAY QSAQNAPFDN TTTTAILEYK SALCPAKCTT KPVMPRLPAY 240 NDTATVTAFS GSLRSPRKVE VPTDIDENLF FTIGLGLNNC PKNSRARRCQ GPNGTRFTAS 300 MNNVSFVFPS NIALLQAYQQ KVPGIYTTDF PAKPPVKFDY TGNVSRSLFQ PVRGTKLYKL 360 KYGSRVQIVL QDTSIVTPEN HPIHLHGYDF YIIAEGFGNF NPKTHKSKFN LVDPPMRNTV 420 AVPSNGWAVI RFVADNPGVW LMHCHLDVHI TWGLAMAFLV EDGIGELQSV EPPPADLPIC 480 * 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07731 | Cu-oxidase_2 | 1.0e-45 | 329 | 463 | 140 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. | ||
PLN02191 | PLN02191 | 3.0e-50 | 3 | 458 | 494 | + L-ascorbate oxidase | ||
PLN02604 | PLN02604 | 1.0e-57 | 3 | 469 | 506 | + oxidoreductase | ||
TIGR03388 | ascorbase | 5.0e-67 | 3 | 464 | 506 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
TIGR03389 | laccase | 0 | 2 | 480 | 484 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. |
Gene Ontology | |
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GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK92474.1 | 0 | 1 | 480 | 71 | 550 | unknown [Populus trichocarpa] |
EMBL | CAA74104.1 | 0 | 1 | 480 | 95 | 574 | laccase [Populus trichocarpa] |
RefSeq | XP_002312186.1 | 0 | 1 | 480 | 95 | 574 | laccase 90a [Populus trichocarpa] |
RefSeq | XP_002315131.1 | 0 | 1 | 480 | 96 | 575 | laccase 90c [Populus trichocarpa] |
RefSeq | XP_002520796.1 | 0 | 1 | 480 | 97 | 577 | laccase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 0 | 3 | 458 | 69 | 521 | A Chain A, Raphanus Sativus Anionic Peroxidase. |
PDB | 1asq_A | 0 | 3 | 458 | 69 | 521 | A Chain A, Raphanus Sativus Anionic Peroxidase. |
PDB | 1asp_B | 0 | 3 | 458 | 69 | 521 | A Chain A, Raphanus Sativus Anionic Peroxidase. |
PDB | 1asp_A | 0 | 3 | 458 | 69 | 521 | A Chain A, Raphanus Sativus Anionic Peroxidase. |
PDB | 1aso_B | 0 | 3 | 458 | 69 | 521 | A Chain A, Raphanus Sativus Anionic Peroxidase. |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DY297248 | 342 | 121 | 459 | 0 |
HO797675 | 487 | 1 | 481 | 0 |
FC900507 | 290 | 121 | 408 | 0 |
EX274037 | 312 | 155 | 464 | 0 |
DW243722 | 281 | 163 | 441 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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