y
Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00009758m |
Family | AA1 |
Protein Properties | Length: 584 Molecular Weight: 62819.5 Isoelectric Point: 7.8504 |
Chromosome | Chromosome/Scaffold: 004834 Start: 7809 End: 9877 |
Description | laccase 17 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA1 | 32 | 569 | 0 |
AETRKYQFDVRMASVTRLCGTKSIVTVNGQFPGPTLFAREGDRVEVAVVNRSPYNVSLHWHGVRQLLSGWADGPAYITQCPIPSGGRYVYRYRIAGQRGT LWWHAHVSWLRATLYGPIIILPPAGVPYPFPAPDEEVPLMLGEWWRNDTEAVIARALRTGGGPDVSDAYTINGLPGPLYNCSGSRDTFRLRVRPGRTYML RLINAALNDELFFSVANHTLTVVDVDALYVKPFAVDTLVIAPGQTSNVLLAAKPAYPGARFYMEARPYTNTQGTFDNTTVAGILEYEDPSGAAAAASNQL PIFAPTLPQINDTSFVANYTAKLRSLASAAYPAAVPQSIDRRFFFTVGLGTHPCAVNGTCQGPNGSRFAASINNVSFVLPTTALLQAHFAGRSKSNGVYA TDFPAFPLVPFNYTGPPPNNTNVMNGTKVVVLPFGTTVELVLQDTSILGAESHPLHLHGFNFYVVGQGFGNFDPATDPARFNLADPVERNTVGVPAGGWV AIRFRADNPGVWFMHCHLEVHMSWGLKMAWLVLDGSLP |
Full Sequence |
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Protein Sequence Length: 584 Download |
MASSSAVPSS ASAAAVAFAA AVLLLAAVGA EAETRKYQFD VRMASVTRLC GTKSIVTVNG 60 QFPGPTLFAR EGDRVEVAVV NRSPYNVSLH WHGVRQLLSG WADGPAYITQ CPIPSGGRYV 120 YRYRIAGQRG TLWWHAHVSW LRATLYGPII ILPPAGVPYP FPAPDEEVPL MLGEWWRNDT 180 EAVIARALRT GGGPDVSDAY TINGLPGPLY NCSGSRDTFR LRVRPGRTYM LRLINAALND 240 ELFFSVANHT LTVVDVDALY VKPFAVDTLV IAPGQTSNVL LAAKPAYPGA RFYMEARPYT 300 NTQGTFDNTT VAGILEYEDP SGAAAAASNQ LPIFAPTLPQ INDTSFVANY TAKLRSLASA 360 AYPAAVPQSI DRRFFFTVGL GTHPCAVNGT CQGPNGSRFA ASINNVSFVL PTTALLQAHF 420 AGRSKSNGVY ATDFPAFPLV PFNYTGPPPN NTNVMNGTKV VVLPFGTTVE LVLQDTSILG 480 AESHPLHLHG FNFYVVGQGF GNFDPATDPA RFNLADPVER NTVGVPAGGW VAIRFRADNP 540 GVWFMHCHLE VHMSWGLKMA WLVLDGSLPN QKLPPPPSDL PQC* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07732 | Cu-oxidase_3 | 2.0e-50 | 40 | 151 | 114 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. | ||
PLN02191 | PLN02191 | 6.0e-75 | 35 | 557 | 556 | + L-ascorbate oxidase | ||
PLN02604 | PLN02604 | 2.0e-75 | 34 | 557 | 558 | + oxidoreductase | ||
TIGR03388 | ascorbase | 2.0e-92 | 34 | 557 | 561 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
TIGR03389 | laccase | 0 | 33 | 583 | 552 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. |
Gene Ontology | |
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GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EEC71780.1 | 0 | 14 | 583 | 9 | 577 | hypothetical protein OsI_04394 [Oryza sativa Indica Group] |
RefSeq | NP_001044773.1 | 0 | 14 | 583 | 9 | 577 | Os01g0842500 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001055747.1 | 0 | 9 | 572 | 4 | 563 | Os05g0458600 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002439916.1 | 0 | 33 | 583 | 32 | 585 | hypothetical protein SORBIDRAFT_09g022510 [Sorghum bicolor] |
RefSeq | XP_002458747.1 | 0 | 1 | 583 | 1 | 579 | hypothetical protein SORBIDRAFT_03g039530 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 0 | 32 | 557 | 1 | 517 | A Chain A, X-Structure Of The Old Yellow Enzyme Homologue From Zymomonas Mobilis (Ncr) |
PDB | 1asq_A | 0 | 32 | 557 | 1 | 517 | A Chain A, X-Structure Of The Old Yellow Enzyme Homologue From Zymomonas Mobilis (Ncr) |
PDB | 1asp_B | 0 | 32 | 557 | 1 | 517 | A Chain A, X-Structure Of The Old Yellow Enzyme Homologue From Zymomonas Mobilis (Ncr) |
PDB | 1asp_A | 0 | 32 | 557 | 1 | 517 | A Chain A, X-Structure Of The Old Yellow Enzyme Homologue From Zymomonas Mobilis (Ncr) |
PDB | 1aso_B | 0 | 32 | 557 | 1 | 517 | A Chain A, X-Structure Of The Old Yellow Enzyme Homologue From Zymomonas Mobilis (Ncr) |