y
Basic Information | |
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Species | Capsella rubella |
Cazyme ID | Carubv10002622m |
Family | AA1 |
Protein Properties | Length: 569 Molecular Weight: 62913.7 Isoelectric Point: 7.4609 |
Chromosome | Chromosome/Scaffold: 6 Start: 2205461 End: 2207411 |
Description | laccase 13 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA1 | 20 | 551 | 0 |
AEVHFHEFIIQETPVKRLCRVHNSITVNGQFPGPTLEVRNGDSLVITAINKARYNISLHWHGIRQMRNPWADGPEYITQCPIQPGGSYTYKFTIEDQEGT LWWHAHSRWLRATVYGALIIRPPLSSPHYPFPVLPKREITLLLGEWWDRNPMDVLNLAQFTGAAPNISDAFTINGQPGDLYRCSSQETLRFLVGSGEIVL LRVINSALNQELFFGVANHKLTVVAADASYTKPFSTNVIMLGPGQTTDVLFTADQPPEHYYMAAHAYNSANAAFDNTTTTAILKYKDASCVTLQGKSLAR AIPAQLPGFNDTATAAAFTAQMKSPSKVKVPLEIDENLFFTVGLGLFNCTTPNTQRCQGPNGTRFTASMNNVSFVFPKGNSIMQAYYQGTPAGVFTTDFP PTPPVTFDYTGNVSRGLWQPTRGTKAYKLKFKSKVQIILQDTSIVTTENHPMHLHGYEFYVVGTGVGNFNPNTDTASFNLIDPPRRNTIGTPPGGWVAIR FVANNPGAWLMHCHIDAHIFWGLAMVFLVENG |
Full Sequence |
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Protein Sequence Length: 569 Download |
MELLSYFVLL VVFVASLVNA EVHFHEFIIQ ETPVKRLCRV HNSITVNGQF PGPTLEVRNG 60 DSLVITAINK ARYNISLHWH GIRQMRNPWA DGPEYITQCP IQPGGSYTYK FTIEDQEGTL 120 WWHAHSRWLR ATVYGALIIR PPLSSPHYPF PVLPKREITL LLGEWWDRNP MDVLNLAQFT 180 GAAPNISDAF TINGQPGDLY RCSSQETLRF LVGSGEIVLL RVINSALNQE LFFGVANHKL 240 TVVAADASYT KPFSTNVIML GPGQTTDVLF TADQPPEHYY MAAHAYNSAN AAFDNTTTTA 300 ILKYKDASCV TLQGKSLARA IPAQLPGFND TATAAAFTAQ MKSPSKVKVP LEIDENLFFT 360 VGLGLFNCTT PNTQRCQGPN GTRFTASMNN VSFVFPKGNS IMQAYYQGTP AGVFTTDFPP 420 TPPVTFDYTG NVSRGLWQPT RGTKAYKLKF KSKVQIILQD TSIVTTENHP MHLHGYEFYV 480 VGTGVGNFNP NTDTASFNLI DPPRRNTIGT PPGGWVAIRF VANNPGAWLM HCHIDAHIFW 540 GLAMVFLVEN GEGHLQSVQS PPLDLPQC* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02191 | PLN02191 | 6.0e-34 | 38 | 276 | 262 | + L-ascorbate oxidase | ||
pfam07731 | Cu-oxidase_2 | 1.0e-39 | 429 | 552 | 124 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. | ||
pfam07732 | Cu-oxidase_3 | 4.0e-54 | 29 | 144 | 118 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. | ||
TIGR03388 | ascorbase | 1.0e-81 | 38 | 546 | 548 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
TIGR03389 | laccase | 0 | 20 | 568 | 553 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. |
Gene Ontology | |
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GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_180580.1 | 0 | 1 | 568 | 7 | 570 | LAC3 (laccase 3); laccase [Arabidopsis thaliana] |
RefSeq | NP_196330.3 | 0 | 2 | 568 | 3 | 569 | LAC13 (laccase 13); laccase [Arabidopsis thaliana] |
RefSeq | XP_002319955.1 | 0 | 1 | 568 | 8 | 576 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002326089.1 | 0 | 3 | 568 | 16 | 576 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002516345.1 | 0 | 3 | 568 | 15 | 577 | laccase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 0 | 38 | 546 | 19 | 521 | A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12 |
PDB | 1asq_A | 0 | 38 | 546 | 19 | 521 | A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12 |
PDB | 1asp_B | 0 | 38 | 546 | 19 | 521 | A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12 |
PDB | 1asp_A | 0 | 38 | 546 | 19 | 521 | A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12 |
PDB | 1aso_B | 0 | 38 | 546 | 19 | 521 | A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12 |