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Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.010G183500.1 |
Family | AA1 |
Protein Properties | Length: 583 Molecular Weight: 64164.6 Isoelectric Point: 7.7824 |
Chromosome | Chromosome/Scaffold: 10 Start: 18075666 End: 18078917 |
Description | laccase 12 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA1 | 34 | 565 | 0 |
AKSHYHDFVIQATPVKRLCKTQNSITVNGMFPGPTLEVNNGDTLVVNVVNKARYNVTIHWHGIRQMRTGWADGPEFVTQCPIRPGGSYTYRFTIQGQEGT LWWHAHSSWLRATVYGALIIHPKEGSSYPFSKQPKRETAILLGEWWNANPIDVVRESTRTGGTPNSSDAYTINGQPGDLYNCSSQDTVIVPIDSGETNLL RVVNSALNQPLFFTVANHKLTVVGADASYVKPFTTSVLMLGPGQTTDVLISGDQNPSRYYMAARAYQSAQNAPFDNTTTTAILEYKSSPCAAKNCSSNKP IMPPLPTFNDTATVTAFTSSFKSTDKTFVPTDIDESLFFTVGLGLNPCPPNFNKSSQCQGPNGTRFTASMNNVSFVLPSNFSLLQAHHQRIQGVFTTDFP ANPPRKFDYTGNVSRSLFTPVPGTKLYRLKYGSRVQIVLQDTSIVTSENHPIHLHGYDFYIIAQGFGNYNPRTDPSKFNLVDPPLRNTVAVPVNGWAVIR FVADNPGVWLMHCHLDVHITWGLATAFLVENG |
Full Sequence |
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Protein Sequence Length: 583 Download |
MEVFNNIFAI NHRCSSFFLG LLLLLASALS LANAKSHYHD FVIQATPVKR LCKTQNSITV 60 NGMFPGPTLE VNNGDTLVVN VVNKARYNVT IHWHGIRQMR TGWADGPEFV TQCPIRPGGS 120 YTYRFTIQGQ EGTLWWHAHS SWLRATVYGA LIIHPKEGSS YPFSKQPKRE TAILLGEWWN 180 ANPIDVVRES TRTGGTPNSS DAYTINGQPG DLYNCSSQDT VIVPIDSGET NLLRVVNSAL 240 NQPLFFTVAN HKLTVVGADA SYVKPFTTSV LMLGPGQTTD VLISGDQNPS RYYMAARAYQ 300 SAQNAPFDNT TTTAILEYKS SPCAAKNCSS NKPIMPPLPT FNDTATVTAF TSSFKSTDKT 360 FVPTDIDESL FFTVGLGLNP CPPNFNKSSQ CQGPNGTRFT ASMNNVSFVL PSNFSLLQAH 420 HQRIQGVFTT DFPANPPRKF DYTGNVSRSL FTPVPGTKLY RLKYGSRVQI VLQDTSIVTS 480 ENHPIHLHGY DFYIIAQGFG NYNPRTDPSK FNLVDPPLRN TVAVPVNGWA VIRFVADNPG 540 VWLMHCHLDV HITWGLATAF LVENGVGELQ SIESPPEDLP LC* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07732 | Cu-oxidase_3 | 1.0e-55 | 42 | 158 | 119 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. | ||
PLN02191 | PLN02191 | 2.0e-71 | 52 | 560 | 550 | + L-ascorbate oxidase | ||
PLN02604 | PLN02604 | 1.0e-81 | 52 | 571 | 560 | + oxidoreductase | ||
TIGR03388 | ascorbase | 3.0e-95 | 52 | 579 | 565 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
TIGR03389 | laccase | 0 | 35 | 582 | 553 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. |
Gene Ontology | |
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GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI25418.1 | 0 | 16 | 582 | 13 | 577 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002312187.1 | 0 | 33 | 582 | 13 | 562 | laccase 90b [Populus trichocarpa] |
RefSeq | XP_002315130.1 | 0 | 1 | 582 | 1 | 582 | laccase 90d [Populus trichocarpa] |
RefSeq | XP_002315131.1 | 0 | 1 | 582 | 1 | 575 | laccase 90c [Populus trichocarpa] |
RefSeq | XP_002520797.1 | 0 | 1 | 582 | 1 | 581 | laccase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 0 | 52 | 560 | 19 | 521 | A Chain A, Raphanus Sativus Anionic Peroxidase. |
PDB | 1asq_A | 0 | 52 | 560 | 19 | 521 | A Chain A, Raphanus Sativus Anionic Peroxidase. |
PDB | 1asp_B | 0 | 52 | 560 | 19 | 521 | A Chain A, Raphanus Sativus Anionic Peroxidase. |
PDB | 1asp_A | 0 | 52 | 560 | 19 | 521 | A Chain A, Raphanus Sativus Anionic Peroxidase. |
PDB | 1aso_B | 0 | 52 | 560 | 19 | 521 | A Chain A, Raphanus Sativus Anionic Peroxidase. |