y
Basic Information | |
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Species | Brachypodium distachyon |
Cazyme ID | Bradi1g24910.1 |
Family | AA1 |
Protein Properties | Length: 600 Molecular Weight: 65547.8 Isoelectric Point: 8.8289 |
Chromosome | Chromosome/Scaffold: 1 Start: 20138247 End: 20140317 |
Description | laccase 17 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA1 | 31 | 582 | 0 |
TRHYDFNVQMANVTRLCATKSIMTVNGEFPGPALVAREGDRVLVRVTNQVSHNMTLHWHGIRQLRSGWADGPAYVAQCPIQIGQSYVYNFNITGQRGTLW WHAHISWIRATVYGAIVILPELGIPYPLAAPHEEVPILFGEWWKANTEAVVKQALQTGGAPNISDAFTINGLPGPLYNCSAKGMNELVLKVEAGKTYLLR LINAALNDELFFVIANHKLTVVEVDAVCVKPFTVNTLVISPGQTTNVLLTAKPFNPKANFYMSAVPYSTIRPGTFDNTTVTGILEYHNPNSGSASSSFDK DLPLFKPTMPRFNDTGPVTNFTTKLRSLATATYPVIVPRSVDKRFLFTIGPGTLPCPVNMTCQGPTNVTRFAAAMNNVSLVFPSTALLQSHYTGMGMSKG VYASNFPTAPLTPFSYTGTPPNNINVAKGTRLLVLPFNTSVELVMQETSILGVESHPLHLHGFNFFVVGQGFGNYDAVNDLAKFNLVDPVERNTVGVPAS GWVAIRFLADNPGVWFMHCHLEVHTTWGLRMAWLVLDGSLANQKLNRHLIFP |
Full Sequence |
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Protein Sequence Length: 600 Download |
MAMAIPSGVP SPCSLLMAIL VLLIVQVQGI TRHYDFNVQM ANVTRLCATK SIMTVNGEFP 60 GPALVAREGD RVLVRVTNQV SHNMTLHWHG IRQLRSGWAD GPAYVAQCPI QIGQSYVYNF 120 NITGQRGTLW WHAHISWIRA TVYGAIVILP ELGIPYPLAA PHEEVPILFG EWWKANTEAV 180 VKQALQTGGA PNISDAFTIN GLPGPLYNCS AKGMNELVLK VEAGKTYLLR LINAALNDEL 240 FFVIANHKLT VVEVDAVCVK PFTVNTLVIS PGQTTNVLLT AKPFNPKANF YMSAVPYSTI 300 RPGTFDNTTV TGILEYHNPN SGSASSSFDK DLPLFKPTMP RFNDTGPVTN FTTKLRSLAT 360 ATYPVIVPRS VDKRFLFTIG PGTLPCPVNM TCQGPTNVTR FAAAMNNVSL VFPSTALLQS 420 HYTGMGMSKG VYASNFPTAP LTPFSYTGTP PNNINVAKGT RLLVLPFNTS VELVMQETSI 480 LGVESHPLHL HGFNFFVVGQ GFGNYDAVND LAKFNLVDPV ERNTVGVPAS GWVAIRFLAD 540 NPGVWFMHCH LEVHTTWGLR MAWLVLDGSL ANQKLNRHLI FPNASRHTLP EFVLPRLIG* 600 660 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07732 | Cu-oxidase_3 | 6.0e-52 | 37 | 151 | 117 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. | ||
PLN02191 | PLN02191 | 2.0e-66 | 16 | 559 | 571 | + L-ascorbate oxidase | ||
PLN02604 | PLN02604 | 1.0e-72 | 15 | 561 | 580 | + oxidoreductase | ||
TIGR03388 | ascorbase | 1.0e-86 | 31 | 554 | 560 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
TIGR03389 | laccase | 0 | 29 | 575 | 548 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. |
Gene Ontology | |
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GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAL73968.1 | 0 | 1 | 575 | 1 | 568 | AF465468_1 laccase LAC5-6 [Lolium perenne] |
GenBank | EAZ14115.1 | 0 | 26 | 575 | 23 | 567 | hypothetical protein OsJ_04039 [Oryza sativa Japonica Group] |
GenBank | EEC71777.1 | 0 | 26 | 575 | 23 | 567 | hypothetical protein OsI_04389 [Oryza sativa Indica Group] |
RefSeq | NP_001044772.1 | 0 | 26 | 575 | 25 | 569 | Os01g0842400 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001146658.1 | 0 | 3 | 575 | 1 | 574 | hypothetical protein LOC100280258 [Zea mays] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 0 | 32 | 559 | 4 | 517 | A Chain A, Crystal Structure Of A Mammalian Sialyltransferase |
PDB | 1asq_A | 0 | 32 | 559 | 4 | 517 | A Chain A, Crystal Structure Of A Mammalian Sialyltransferase |
PDB | 1asp_B | 0 | 32 | 559 | 4 | 517 | A Chain A, Crystal Structure Of A Mammalian Sialyltransferase |
PDB | 1asp_A | 0 | 32 | 559 | 4 | 517 | A Chain A, Crystal Structure Of A Mammalian Sialyltransferase |
PDB | 1aso_B | 0 | 32 | 559 | 4 | 517 | A Chain A, Crystal Structure Of A Mammalian Sialyltransferase |