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Basic Information | |
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Species | Sorghum bicolor |
Cazyme ID | Sb03g039570.1 |
Family | AA1 |
Protein Properties | Length: 580 Molecular Weight: 63559.2 Isoelectric Point: 8.3703 |
Chromosome | Chromosome/Scaffold: 3 Start: 67242057 End: 67244587 |
Description | laccase 2 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA1 | 39 | 566 | 0 |
THYYTFNVQMTNVTRLCVTKSIPTVNGQFPGPKLVVREGDRLVVKVHNHINYNVSFHWHGVRQLRNGWADGPAYITQCPIQGGQSYVYDFTITGQRGTLW WHAHFSWLRVHLYGPLVILPKRGEGYPFPRPYKEVPILFGEWFNADTEAVINQALQTGGGPNVSDAYTFNGLPGPTYNCSSKDTYKLKVKPGRTYMLRLI NSALNDELFFGIANHTLTVVEADANYVKPFTVNTLVISPGQTMNVLLTTPPNPASPAYAMAIAPYTNTQGTFDNTTAAAVLEYAPTTTTLPPLPLPALPL YNDTGAVTNFSRNFRSLNSAQYPAQVPAAVDRHLLFTVGLGTDPCPSNQTCQGPNGTKFAASINNNSFFRPRTALLEAHYQRRYAGVLLADFPTTPPHPF NYTGTPPNNTFVQHGTRVVPLRFNTSVELVLQGTSIQGAESHPLHLHGYDFFVVGQGFGNFDPVNDPPNYNLADPVERNTISVPTAGWVAVRFLADNPGV WLMHCHFDVHLSWGLSMAWLVNDGPLPN |
Full Sequence |
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Protein Sequence Length: 580 Download |
MGSRHGLRRG GQAAAVFSAC PFLAFAVLLA LPGLAAGDTH YYTFNVQMTN VTRLCVTKSI 60 PTVNGQFPGP KLVVREGDRL VVKVHNHINY NVSFHWHGVR QLRNGWADGP AYITQCPIQG 120 GQSYVYDFTI TGQRGTLWWH AHFSWLRVHL YGPLVILPKR GEGYPFPRPY KEVPILFGEW 180 FNADTEAVIN QALQTGGGPN VSDAYTFNGL PGPTYNCSSK DTYKLKVKPG RTYMLRLINS 240 ALNDELFFGI ANHTLTVVEA DANYVKPFTV NTLVISPGQT MNVLLTTPPN PASPAYAMAI 300 APYTNTQGTF DNTTAAAVLE YAPTTTTLPP LPLPALPLYN DTGAVTNFSR NFRSLNSAQY 360 PAQVPAAVDR HLLFTVGLGT DPCPSNQTCQ GPNGTKFAAS INNNSFFRPR TALLEAHYQR 420 RYAGVLLADF PTTPPHPFNY TGTPPNNTFV QHGTRVVPLR FNTSVELVLQ GTSIQGAESH 480 PLHLHGYDFF VVGQGFGNFD PVNDPPNYNL ADPVERNTIS VPTAGWVAVR FLADNPGVWL 540 MHCHFDVHLS WGLSMAWLVN DGPLPNQKML PPPSDLPKC* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07732 | Cu-oxidase_3 | 7.0e-52 | 45 | 161 | 119 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. | ||
PLN02191 | PLN02191 | 5.0e-64 | 42 | 557 | 547 | + L-ascorbate oxidase | ||
PLN02604 | PLN02604 | 2.0e-79 | 55 | 553 | 536 | + oxidoreductase | ||
TIGR03388 | ascorbase | 2.0e-82 | 55 | 553 | 531 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
TIGR03389 | laccase | 0 | 39 | 579 | 542 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. |
Gene Ontology | |
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GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACG47007.1 | 0 | 32 | 579 | 33 | 582 | L-ascorbate oxidase precursor [Zea mays] |
RefSeq | NP_001105874.1 | 0 | 30 | 579 | 26 | 582 | putative laccase [Zea mays] |
RefSeq | NP_001105921.1 | 0 | 32 | 579 | 33 | 588 | putative laccase [Zea mays] |
Swiss-Prot | Q5N9W4 | 0 | 1 | 579 | 1 | 547 | LAC5_ORYSJ RecName: Full=Putative laccase-5; AltName: Full=Benzenediol:oxygen oxidoreductase 5; AltName: Full=Urishiol oxidase 5; AltName: Full=Diphenol oxidase 5; Flags: Precursor |
RefSeq | XP_002456622.1 | 0 | 1 | 579 | 1 | 579 | hypothetical protein SORBIDRAFT_03g039570 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 0 | 41 | 556 | 5 | 520 | A Chain A, Catalytic Function And Substrate Recognition Of The Pectate Lyase From Thermotoga Maritima |
PDB | 1asq_A | 0 | 41 | 556 | 5 | 520 | A Chain A, Catalytic Function And Substrate Recognition Of The Pectate Lyase From Thermotoga Maritima |
PDB | 1asp_B | 0 | 41 | 556 | 5 | 520 | A Chain A, Catalytic Function And Substrate Recognition Of The Pectate Lyase From Thermotoga Maritima |
PDB | 1asp_A | 0 | 41 | 556 | 5 | 520 | A Chain A, Catalytic Function And Substrate Recognition Of The Pectate Lyase From Thermotoga Maritima |
PDB | 1aso_B | 0 | 41 | 556 | 5 | 520 | A Chain A, Catalytic Function And Substrate Recognition Of The Pectate Lyase From Thermotoga Maritima |