y
Basic Information | |
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Species | Carica papaya |
Cazyme ID | evm.model.supercontig_33.69 |
Family | GH5 |
Protein Properties | Length: 534 Molecular Weight: 59660.1 Isoelectric Point: 8.205 |
Chromosome | Chromosome/Scaffold: 33 Start: 638711 End: 641332 |
Description | Cellulase (glycosyl hydrolase family 5) protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH5 | 12 | 323 | 1.1e-37 |
IVDEKRQRVKLACVNWAMHLEPMVAEGLSKSPMDLISKTIVKMGFNCVRFTWPTFLVTNDSLASLTVRQSFQKLGLSDSIPGIQANNPSIIDLPLIKAYQ AVVSNLGANKVMVILDNHISKPGWCCSNTDGNGFFGDQYFNSYVWMTGLTRIATIFNGVSAVVGMSLRNELRGPRQNVNDWYRYMIAGAVSVHEANPNVL VILSGLNYDRDLSFIQSRVINLTFTGKLVFEWHWYAFSDGSAWESGNPNQVCGRAMSNMKSTSEFLLGQGWPLFVSEFGADQRGTNMNDNRYLNCFLGVA ADLDLDWALWTL |
Full Sequence |
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Protein Sequence Length: 534 Download |
MAVPLSTNNR WIVDEKRQRV KLACVNWAMH LEPMVAEGLS KSPMDLISKT IVKMGFNCVR 60 FTWPTFLVTN DSLASLTVRQ SFQKLGLSDS IPGIQANNPS IIDLPLIKAY QAVVSNLGAN 120 KVMVILDNHI SKPGWCCSNT DGNGFFGDQY FNSYVWMTGL TRIATIFNGV SAVVGMSLRN 180 ELRGPRQNVN DWYRYMIAGA VSVHEANPNV LVILSGLNYD RDLSFIQSRV INLTFTGKLV 240 FEWHWYAFSD GSAWESGNPN QVCGRAMSNM KSTSEFLLGQ GWPLFVSEFG ADQRGTNMND 300 NRYLNCFLGV AADLDLDWAL WTLVGSYYLR EGVTGENEYF GLFDWNWRDI RNSSFLHKIS 360 AIQIPFQGIG LSKKNKHKII FHPSTGLCIL RNSLHNPLIL GPCTKSEGWS YTSQQIISLK 420 GTHLCLRAEE LEKPVQLSNV CTDSSSKWEP ISDSKMHLSS KLSNGMSICL DVDSTNTIVT 480 NNCKCLSGDN RCDPASQWFK LIDSTRSLSV TNSFHRTKPI LESFKSGSTQ NNL* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
smart00458 | RICIN | 1.0e-5 | 380 | 483 | 113 | + Ricin-type beta-trefoil. Carbohydrate-binding domain formed from presumed gene triplication. | ||
cd00161 | RICIN | 1.0e-5 | 378 | 490 | 125 | + Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ligand binding occurs on exposed surfaces of the compact domain sturcture. | ||
pfam00150 | Cellulase | 7.0e-8 | 49 | 302 | 258 | + Cellulase (glycosyl hydrolase family 5). |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAD31066.1 | 0 | 1 | 521 | 1 | 522 | AC007357_15 F3F19.15 [Arabidopsis thaliana] |
RefSeq | XP_002285424.1 | 0 | 1 | 505 | 25 | 529 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002312657.1 | 0 | 2 | 519 | 9 | 521 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002315653.1 | 0 | 1 | 511 | 1 | 511 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002515055.1 | 0 | 2 | 521 | 31 | 550 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1vrx_B | 0.00005 | 7 | 322 | 8 | 320 | A Chain A, Endocellulase E1 From Acidothermus Cellulolyticus Mutant Y245g |
PDB | 1vrx_A | 0.00005 | 7 | 322 | 8 | 320 | A Chain A, Endocellulase E1 From Acidothermus Cellulolyticus Mutant Y245g |
PDB | 1ece_B | 0.0002 | 7 | 249 | 8 | 243 | A Chain A, Acidothermus Cellulolyticus Endocellulase E1 Catalytic Domain In Complex With A Cellotetraose |
PDB | 1ece_A | 0.0002 | 7 | 249 | 8 | 243 | A Chain A, Acidothermus Cellulolyticus Endocellulase E1 Catalytic Domain In Complex With A Cellotetraose |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DY282456 | 281 | 1 | 281 | 0 |
CB290890 | 269 | 15 | 283 | 0 |
FC879052 | 258 | 1 | 258 | 0 |
DW160634 | 285 | 2 | 284 | 0 |
DY972279 | 288 | 2 | 287 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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