y
Basic Information | |
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Species | Cucumis sativus |
Cazyme ID | Cucsa.115550.1 |
Family | GH5 |
Protein Properties | Length: 517 Molecular Weight: 57909.9 Isoelectric Point: 7.9292 |
Chromosome | Chromosome/Scaffold: 00988 Start: 171296 End: 173200 |
Description | Cellulase (glycosyl hydrolase family 5) protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH5 | 13 | 328 | 1.7e-36 |
IVDATTGNRVKLMCVNWAGHMQGMLAEGLHLRPLDDIAALVVKSRFNCVRLTYSIHMFTRHANLTVQQSFENFDMKDALAGIAQNNPSILNMTVVQAYGA VIDSLAAHRVMVVSDNHISQPRWCCNNDDGNGFFGDRYFDPQEWLQGISLAAQNLKSKSQVVAMSLRNEPRGPNQNVEMWFQYMSQGAKLIHQINPNALV VVSGLSYDTDLSFLKNRSMGFNLDNKLVFEAHLYSFTNNMGDFWMSKPLNTFCASVNQGFEDRAGFLVRGQNPIPLFVSEFGIDQRGVNEGQNRFLSCFF SYLTENDFDWGLWALQ |
Full Sequence |
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Protein Sequence Length: 517 Download |
ACSLPLSTNG RWIVDATTGN RVKLMCVNWA GHMQGMLAEG LHLRPLDDIA ALVVKSRFNC 60 VRLTYSIHMF TRHANLTVQQ SFENFDMKDA LAGIAQNNPS ILNMTVVQAY GAVIDSLAAH 120 RVMVVSDNHI SQPRWCCNND DGNGFFGDRY FDPQEWLQGI SLAAQNLKSK SQVVAMSLRN 180 EPRGPNQNVE MWFQYMSQGA KLIHQINPNA LVVVSGLSYD TDLSFLKNRS MGFNLDNKLV 240 FEAHLYSFTN NMGDFWMSKP LNTFCASVNQ GFEDRAGFLV RGQNPIPLFV SEFGIDQRGV 300 NEGQNRFLSC FFSYLTENDF DWGLWALQGS YYYREGVKNA EENFGVLDST FAKAKNSKLF 360 LKRFQLMHTK LQDPSSNFTT SLIMYHPLSG GCVRMNKKYQ LGISSCKTSN RWIHEQDSSP 420 IKLAGSILCL KAIGVGLPPI LSQDCSSQQS IWKYGSNAKL QLATIDEQGQ ALCLQRAASH 480 SHQLVTNKCL CSSDSQCQED PQSQWFTLVP SNLRLI* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00150 | Cellulase | 2.0e-11 | 45 | 327 | 291 | + Cellulase (glycosyl hydrolase family 5). |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI34404.1 | 0 | 3 | 513 | 40 | 560 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002272386.1 | 0 | 3 | 513 | 23 | 531 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002272534.1 | 0 | 3 | 513 | 24 | 544 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002509877.1 | 0 | 3 | 513 | 20 | 546 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
RefSeq | XP_002509879.1 | 0 | 9 | 515 | 30 | 537 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ece_B | 0.0000000007 | 8 | 326 | 8 | 320 | A Chain A, Acidothermus Cellulolyticus Endocellulase E1 Catalytic Domain In Complex With A Cellotetraose |
PDB | 1ece_A | 0.0000000007 | 8 | 326 | 8 | 320 | A Chain A, Acidothermus Cellulolyticus Endocellulase E1 Catalytic Domain In Complex With A Cellotetraose |
PDB | 1vrx_B | 0.0000000009 | 8 | 326 | 8 | 320 | A Chain A, Endocellulase E1 From Acidothermus Cellulolyticus Mutant Y245g |
PDB | 1vrx_A | 0.0000000009 | 8 | 326 | 8 | 320 | A Chain A, Endocellulase E1 From Acidothermus Cellulolyticus Mutant Y245g |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DY937433 | 282 | 3 | 282 | 0 |
DY941710 | 265 | 3 | 265 | 0 |
DY937488 | 265 | 3 | 265 | 0 |
DY941215 | 265 | 3 | 265 | 0 |
EL513843 | 277 | 3 | 278 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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