y
Basic Information | |
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Species | Ricinus communis |
Cazyme ID | 29929.m004792 |
Family | GH5 |
Protein Properties | Length: 566 Molecular Weight: 63062.1 Isoelectric Point: 6.8212 |
Chromosome | Chromosome/Scaffold: 29929 Start: 1689518 End: 1692056 |
Description | Cellulase (glycosyl hydrolase family 5) protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH5 | 41 | 352 | 2.52234e-44 |
IVDENGQRVKLACVNWVSHLEAVVAEGLSKQPMDMIAKKIVSMGFNCVRLTWPLYLVTNDTLASLSVRQSFQGLGLLESISGIQANNPSIIDLPLIKAYQ AVVSSLGDNNVMVILDNHISKPGWCCSNFDGNGFFGDTYFNPDLWIKGLTQMATLFNGVTNVIGMSLRNELRGQKQNVNDWYRYMEKGAEAVHSANPDVL VILSGLNYDKDFSFLRNRPVNLSFTGKVVFEVHWYGFSDGQAWRSGNPNQVCGRVVDNLMRISGFLLEQGWPMFVSEFGVDQRGTNVNDNRYLGCFIGVA AELDWDWALWTL |
Full Sequence |
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Protein Sequence Length: 566 Download |
MGKFLSFSSL SVLITFFIAI SAIIPQSQVT ALPLSTNSRW IVDENGQRVK LACVNWVSHL 60 EAVVAEGLSK QPMDMIAKKI VSMGFNCVRL TWPLYLVTND TLASLSVRQS FQGLGLLESI 120 SGIQANNPSI IDLPLIKAYQ AVVSSLGDNN VMVILDNHIS KPGWCCSNFD GNGFFGDTYF 180 NPDLWIKGLT QMATLFNGVT NVIGMSLRNE LRGQKQNVND WYRYMEKGAE AVHSANPDVL 240 VILSGLNYDK DFSFLRNRPV NLSFTGKVVF EVHWYGFSDG QAWRSGNPNQ VCGRVVDNLM 300 RISGFLLEQG WPMFVSEFGV DQRGTNVNDN RYLGCFIGVA AELDWDWALW TLVGSYYLRQ 360 GVIGLNEYYG VLNWNWCDVR NSSFLQQISA LQSPFQGPGL SETNPHKVIF HPSTGLCVQR 420 KSMLEPLRLG SCTDSEAWRY TSENTLTLRG TYFCLQADEL GKPAKLGIIC TDSTSKWDVI 480 SDSKMHLSSK ITNGTAVCLD VDSNNTIVIS TCKCLSRDNT CDPESQWFKL VNSTRSSATA 540 KPSLRINSIL LDLPAKEFFW KFLGLA 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
cd00161 | RICIN | 4.0e-5 | 407 | 519 | 124 | + Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ligand binding occurs on exposed surfaces of the compact domain sturcture. | ||
smart00458 | RICIN | 4.0e-5 | 409 | 512 | 114 | + Ricin-type beta-trefoil. Carbohydrate-binding domain formed from presumed gene triplication. | ||
pfam00150 | Cellulase | 4.0e-13 | 42 | 352 | 319 | + Cellulase (glycosyl hydrolase family 5). |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EEE61202.1 | 0 | 39 | 565 | 36 | 571 | hypothetical protein OsJ_15212 [Oryza sativa Japonica Group] |
RefSeq | XP_002285424.1 | 0 | 29 | 557 | 24 | 549 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002312657.1 | 0 | 23 | 564 | 1 | 542 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002315653.1 | 0 | 31 | 541 | 2 | 512 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002515055.1 | 0 | 1 | 566 | 1 | 566 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1vrx_B | 0.00000000004 | 36 | 325 | 8 | 290 | A Chain A, Endocellulase E1 From Acidothermus Cellulolyticus Mutant Y245g |
PDB | 1vrx_A | 0.00000000004 | 36 | 325 | 8 | 290 | A Chain A, Endocellulase E1 From Acidothermus Cellulolyticus Mutant Y245g |
PDB | 1ece_B | 0.0000000003 | 36 | 325 | 8 | 290 | A Chain A, Acidothermus Cellulolyticus Endocellulase E1 Catalytic Domain In Complex With A Cellotetraose |
PDB | 1ece_A | 0.0000000003 | 36 | 325 | 8 | 290 | A Chain A, Acidothermus Cellulolyticus Endocellulase E1 Catalytic Domain In Complex With A Cellotetraose |
PDB | 2zun_C | 0.0000006 | 49 | 319 | 61 | 344 | A Chain A, Acidothermus Cellulolyticus Endocellulase E1 Catalytic Domain In Complex With A Cellotetraose |