y
Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.008G183400.3 |
Family | GH5 |
Protein Properties | Length: 442 Molecular Weight: 49512.3 Isoelectric Point: 7.608 |
Chromosome | Chromosome/Scaffold: 08 Start: 12536986 End: 12539313 |
Description | Cellulase (glycosyl hydrolase family 5) protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH5 | 16 | 227 | 2.6e-33 |
AVVSSLGDNNVMVILDNHISKPGWCCSNSDGNGFFGDQYFDPDLWITGLTRMASMFNGVPNVVGMSLRNELRGPKQNVNDWYRYMQKGAEAVHSANPDVI VILSGLNYDKDLSFLRNRPVNLTFSRKIVFEVHWYGFTDGQAWKNGNPNQVCGRVVDNMMRISGFLLDQGWPLFMSEFGVDQRGTNVNDNRYLGCFLGVA AELDFDWALWTL |
Full Sequence |
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Protein Sequence Length: 442 Download |
MVTDGDNDVF KVLYSAVVSS LGDNNVMVIL DNHISKPGWC CSNSDGNGFF GDQYFDPDLW 60 ITGLTRMASM FNGVPNVVGM SLRNELRGPK QNVNDWYRYM QKGAEAVHSA NPDVIVILSG 120 LNYDKDLSFL RNRPVNLTFS RKIVFEVHWY GFTDGQAWKN GNPNQVCGRV VDNMMRISGF 180 LLDQGWPLFM SEFGVDQRGT NVNDNRYLGC FLGVAAELDF DWALWTLVGS YYFRQGVIGM 240 NEYYGVLNSN WRETRNSTFL QQISALQSPF RGPGVSEVHL HKVIFHPSTG LCVLRKSMFE 300 PLRLGPCTQS EAWNYTPQKI LSVKGTYFCL QTDELAKPAK LGIICTDSNS KWEAISDSKM 360 HLSSKAPNGT AVCLDIGYNN TIVTSTCKCL SKDNTCDPES QWFKLVNSTR RSSTMTKPSS 420 LISSILNFPA KDFLWKFLGS V* 480 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00150 | Cellulase | 4.0e-11 | 16 | 227 | 216 | + Cellulase (glycosyl hydrolase family 5). |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EEE61202.1 | 0 | 14 | 437 | 136 | 568 | hypothetical protein OsJ_15212 [Oryza sativa Japonica Group] |
RefSeq | XP_002285424.1 | 0 | 14 | 428 | 134 | 545 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002312657.1 | 0 | 13 | 441 | 116 | 544 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002315653.1 | 0 | 13 | 417 | 109 | 512 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002515055.1 | 0 | 14 | 439 | 139 | 564 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1vrx_B | 0.0000009 | 17 | 226 | 100 | 320 | A Chain A, Endocellulase E1 From Acidothermus Cellulolyticus Mutant Y245g |
PDB | 1vrx_A | 0.0000009 | 17 | 226 | 100 | 320 | A Chain A, Endocellulase E1 From Acidothermus Cellulolyticus Mutant Y245g |
PDB | 1ece_B | 0.000006 | 17 | 226 | 100 | 320 | A Chain A, Acidothermus Cellulolyticus Endocellulase E1 Catalytic Domain In Complex With A Cellotetraose |
PDB | 1ece_A | 0.000006 | 17 | 226 | 100 | 320 | A Chain A, Acidothermus Cellulolyticus Endocellulase E1 Catalytic Domain In Complex With A Cellotetraose |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
FN750530 | 266 | 36 | 301 | 0 |
EL515035 | 292 | 50 | 341 | 0 |
GO262263 | 269 | 24 | 292 | 0 |
EL416901 | 253 | 24 | 276 | 0 |
FN750530 | 58 | 302 | 359 | 0.00000002 |
Sequence Alignments (This image is cropped. Click for full image.) |
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