y
Basic Information | |
---|---|
Species | Setaria italica |
Cazyme ID | Si009695m |
Family | GH5 |
Protein Properties | Length: 579 Molecular Weight: 62455.4 Isoelectric Point: 8.853 |
Chromosome | Chromosome/Scaffold: 7 Start: 14261700 End: 14264284 |
Description | Cellulase (glycosyl hydrolase family 5) protein |
View CDS |
External Links |
---|
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GH5 | 42 | 354 | 2.5e-39 |
VVDERGRRVKLACVNWASHLEPMLAEGLGHLPLGAIAAGVAAMGFNCVRLTWPTFLVTDAASSSLTVADSLRRLNLTAALAGVGANNPGFLGLSLADAFG AVVRGLGDSGVMVILDNHVSRPGWCCRAGDGNGFFGDADFDPDVWVEGLRRMAAMFAGEENVVGMSLRNELRGPRQNTADWYRYMQRGAEAVHAANPRVL VILSGLNNDNDLAFLNRRPVHLTFSNKVAFEVHWYSFSDPHQWLAGNANQVCARVAASVARRTLYLLGRGWPVILSEFGVDNRGGNAADNRYWGCVAAAA AGLDLDWALWALQ |
Full Sequence |
---|
Protein Sequence Length: 579 Download |
MARLLVAAVC LAAALALACQ CHEAAGGAAA LPKSLSTSSR WVVDERGRRV KLACVNWASH 60 LEPMLAEGLG HLPLGAIAAG VAAMGFNCVR LTWPTFLVTD AASSSLTVAD SLRRLNLTAA 120 LAGVGANNPG FLGLSLADAF GAVVRGLGDS GVMVILDNHV SRPGWCCRAG DGNGFFGDAD 180 FDPDVWVEGL RRMAAMFAGE ENVVGMSLRN ELRGPRQNTA DWYRYMQRGA EAVHAANPRV 240 LVILSGLNND NDLAFLNRRP VHLTFSNKVA FEVHWYSFSD PHQWLAGNAN QVCARVAASV 300 ARRTLYLLGR GWPVILSEFG VDNRGGNAAD NRYWGCVAAA AAGLDLDWAL WALQGSYYLR 360 EGVAGHDEAY GVLGHDWLRP RNGTALRRVR ALQRPFRGPG LDEAAPYDAL FHPATGLCVV 420 RRRRSSLTLE LGPCNETEAW EYNPEHRLVL RGSWLRPCLR AEGAGRPVRL GVGRAGCAGA 480 QARWLLESKS KLHVAVHAPP SSSSSRSEIL CLDVSADGRS IVTNRCRCLS GGSSRCDPES 540 QWFKLVSSTR KVASGSSVLA QLLLHVLKTF KIWLFNLF* 600 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00150 | Cellulase | 2.0e-12 | 73 | 330 | 264 | + Cellulase (glycosyl hydrolase family 5). |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACF79301.1 | 0 | 21 | 575 | 25 | 576 | unknown [Zea mays] |
GenBank | EEC77495.1 | 0 | 40 | 572 | 36 | 568 | hypothetical protein OsI_16343 [Oryza sativa Indica Group] |
GenBank | EEE61202.1 | 0 | 40 | 572 | 36 | 568 | hypothetical protein OsJ_15212 [Oryza sativa Japonica Group] |
RefSeq | NP_001130915.1 | 0 | 21 | 575 | 25 | 576 | hypothetical protein LOC100192019 [Zea mays] |
RefSeq | XP_002446675.1 | 0 | 34 | 575 | 37 | 586 | hypothetical protein SORBIDRAFT_06g020270 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1vrx_B | 0.0000000006 | 37 | 321 | 8 | 285 | A Chain A, Endocellulase E1 From Acidothermus Cellulolyticus Mutant Y245g |
PDB | 1vrx_A | 0.0000000006 | 37 | 321 | 8 | 285 | A Chain A, Endocellulase E1 From Acidothermus Cellulolyticus Mutant Y245g |
PDB | 1ece_B | 0.0000000007 | 37 | 321 | 8 | 285 | A Chain A, Acidothermus Cellulolyticus Endocellulase E1 Catalytic Domain In Complex With A Cellotetraose |
PDB | 1ece_A | 0.0000000007 | 37 | 321 | 8 | 285 | A Chain A, Acidothermus Cellulolyticus Endocellulase E1 Catalytic Domain In Complex With A Cellotetraose |
PDB | 2zun_C | 0.002 | 50 | 332 | 61 | 354 | A Chain A, Acidothermus Cellulolyticus Endocellulase E1 Catalytic Domain In Complex With A Cellotetraose |