y
Basic Information | |
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Species | Setaria italica |
Cazyme ID | Si009742m |
Family | GH5 |
Protein Properties | Length: 558 Molecular Weight: 61167 Isoelectric Point: 6.8876 |
Chromosome | Chromosome/Scaffold: 7 Start: 23041168 End: 23045609 |
Description | Cellulase (glycosyl hydrolase family 5) protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH5 | 39 | 350 | 7.7e-39 |
VGADGRRVKLACANWASHLEPAAAEGLSRRGVEGIAGRVAAMGFNCVRLTWPTYLATNATLASLPFRWSLERLGMRESVAGVRVNNPALLDLPLIDVFRE VVSALGSKSIMVILDNQMTTPGWCCSRTDGNGFFGDKYFDPDEWLKGLNAMATIFNDTKNVVGMSLRNELRGPNQNISLWYRYMQLGAEAVHAANPNVLV ILSGLDFDNTLSFLHSKKPELRFTGKLVFEQHWYGFSDGGHWEILNQNDACRMVVDSIWAKGLFLLQQGWPLFFSEFGFDMSGTHIGDNRYLTCFLSVAA EMDLDWAIWALQ |
Full Sequence |
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Protein Sequence Length: 558 Download |
MAASSPPTPL LLTLLLLPAL AAAASLPALP LSTASRWLVG ADGRRVKLAC ANWASHLEPA 60 AAEGLSRRGV EGIAGRVAAM GFNCVRLTWP TYLATNATLA SLPFRWSLER LGMRESVAGV 120 RVNNPALLDL PLIDVFREVV SALGSKSIMV ILDNQMTTPG WCCSRTDGNG FFGDKYFDPD 180 EWLKGLNAMA TIFNDTKNVV GMSLRNELRG PNQNISLWYR YMQLGAEAVH AANPNVLVIL 240 SGLDFDNTLS FLHSKKPELR FTGKLVFEQH WYGFSDGGHW EILNQNDACR MVVDSIWAKG 300 LFLLQQGWPL FFSEFGFDMS GTHIGDNRYL TCFLSVAAEM DLDWAIWALQ GSYYIREGIL 360 AYDESYGLLS WDWCTARNPS FIKRINSLQS PFQGPGLPNS REPYNLIFHP QTGLCVLATS 420 SKSLELGPCD RSNAWNYTSA YELVVKSTGQ CLQAKSVGEN AKLGTDCSKP SSKWQLISNS 480 RMHVSAELTK NGTRVCLDAG PDGAIITNQC KCLIIDPACN PESQWFKVIL SSRDTPGGSS 540 ILQLPSVGPW PPTSLSY* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
smart00458 | RICIN | 0.0007 | 407 | 510 | 113 | + Ricin-type beta-trefoil. Carbohydrate-binding domain formed from presumed gene triplication. | ||
cd00161 | RICIN | 0.0003 | 404 | 510 | 121 | + Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ligand binding occurs on exposed surfaces of the compact domain sturcture. | ||
pfam00150 | Cellulase | 6.0e-13 | 77 | 349 | 280 | + Cellulase (glycosyl hydrolase family 5). |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAD41089.2 | 0 | 32 | 556 | 30 | 550 | OSJNBb0011N17.6 [Oryza sativa (japonica cultivar-group)] |
EMBL | CAH67676.1 | 0 | 32 | 556 | 33 | 553 | H0510A06.1 [Oryza sativa (indica cultivar-group)] |
GenBank | EAY94563.1 | 0 | 32 | 556 | 30 | 552 | hypothetical protein OsI_16341 [Oryza sativa Indica Group] |
RefSeq | NP_001132121.1 | 0 | 33 | 556 | 31 | 554 | hypothetical protein LOC100193538 [Zea mays] |
RefSeq | XP_002446674.1 | 0 | 32 | 556 | 31 | 555 | hypothetical protein SORBIDRAFT_06g020260 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1vrx_B | 0.000007 | 33 | 363 | 8 | 335 | A Chain A, Endocellulase E1 From Acidothermus Cellulolyticus Mutant Y245g |
PDB | 1vrx_A | 0.000007 | 33 | 363 | 8 | 335 | A Chain A, Endocellulase E1 From Acidothermus Cellulolyticus Mutant Y245g |
PDB | 1ece_B | 0.00005 | 33 | 363 | 8 | 335 | A Chain A, Acidothermus Cellulolyticus Endocellulase E1 Catalytic Domain In Complex With A Cellotetraose |
PDB | 1ece_A | 0.00005 | 33 | 363 | 8 | 335 | A Chain A, Acidothermus Cellulolyticus Endocellulase E1 Catalytic Domain In Complex With A Cellotetraose |