y
Basic Information | |
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Species | Sorghum bicolor |
Cazyme ID | Sb04g024910.1 |
Family | GH5 |
Protein Properties | Length: 571 Molecular Weight: 60508.6 Isoelectric Point: 5.459 |
Chromosome | Chromosome/Scaffold: 4 Start: 54800378 End: 54802304 |
Description | Cellulase (glycosyl hydrolase family 5) protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH5 | 39 | 353 | 2.94273e-44 |
IVDPAGHRVKLACVNWPSHLDPVVTEGLGRQPVGAITGMIVSMGFNCVRLTYPIALATNASLSALTVRQSLLAHGLSETVGGVEVNNPSFLDLTLIDSLK AVVNALGEKNVMVILDNHISTPGWCCSNDDGNGFFGDRDFDPNVWVDGLGSMATTFADVPNVVGMSLRNELRGPRQNSEDWYTYMQRGAEAVHAANPRAL VIMGGLSYDYDLSFLAARQVGVSFAAENKLVFEVHWYSFSDARAWEAEGANEVCGRAARDFARRGAFLLAGGFPLFLSEFGADSRGGDRKDNRYFPCAAA VAAEHDVDWAYWALQ |
Full Sequence |
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Protein Sequence Length: 571 Download |
MWLVSSTLRA GLCLLLAVVL AGHGEPAAAV TLSTSSRWIV DPAGHRVKLA CVNWPSHLDP 60 VVTEGLGRQP VGAITGMIVS MGFNCVRLTY PIALATNASL SALTVRQSLL AHGLSETVGG 120 VEVNNPSFLD LTLIDSLKAV VNALGEKNVM VILDNHISTP GWCCSNDDGN GFFGDRDFDP 180 NVWVDGLGSM ATTFADVPNV VGMSLRNELR GPRQNSEDWY TYMQRGAEAV HAANPRALVI 240 MGGLSYDYDL SFLAARQVGV SFAAENKLVF EVHWYSFSDA RAWEAEGANE VCGRAARDFA 300 RRGAFLLAGG FPLFLSEFGA DSRGGDRKDN RYFPCAAAVA AEHDVDWAYW ALQGSYALRQ 360 GVVGMDEVYG VLDWSWSKPR NQTVLPRIQA LQRPLQGPGY GEALPYTVLF HPLTGLCAVR 420 RASAAAATTL ELGPCNETDA WAYAPPSSTL VLRDAAAAAG GLPTCLRAEG RGQPARLGTN 480 ACGDPLSTWR LATDSAMHVA VDAAALGLGG GEDGGGGSGM LCLDVGTDGR SIVTNPCACQ 540 RGDGACDPEG QWFKLVTSTR RVARRPAMLA * 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00150 | Cellulase | 3.0e-9 | 78 | 352 | 279 | + Cellulase (glycosyl hydrolase family 5). |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAH67677.1 | 0 | 20 | 570 | 16 | 541 | H0510A06.2 [Oryza sativa (indica cultivar-group)] |
GenBank | EAY86525.1 | 0 | 9 | 560 | 4 | 563 | hypothetical protein OsI_07905 [Oryza sativa Indica Group] |
GenBank | EEC77495.1 | 0 | 20 | 570 | 16 | 557 | hypothetical protein OsI_16343 [Oryza sativa Indica Group] |
GenBank | EEE61202.1 | 0 | 20 | 570 | 16 | 557 | hypothetical protein OsJ_15212 [Oryza sativa Japonica Group] |
RefSeq | XP_002452393.1 | 0 | 1 | 570 | 1 | 570 | hypothetical protein SORBIDRAFT_04g024910 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1vrx_B | 0.00000000006 | 34 | 320 | 8 | 285 | A Chain A, Endocellulase E1 From Acidothermus Cellulolyticus Mutant Y245g |
PDB | 1vrx_A | 0.00000000006 | 34 | 320 | 8 | 285 | A Chain A, Endocellulase E1 From Acidothermus Cellulolyticus Mutant Y245g |
PDB | 1ece_B | 0.00000000008 | 34 | 320 | 8 | 285 | A Chain A, Acidothermus Cellulolyticus Endocellulase E1 Catalytic Domain In Complex With A Cellotetraose |
PDB | 1ece_A | 0.00000000008 | 34 | 320 | 8 | 285 | A Chain A, Acidothermus Cellulolyticus Endocellulase E1 Catalytic Domain In Complex With A Cellotetraose |
PDB | 3rjx_A | 0.0002 | 126 | 358 | 73 | 301 | A Chain A, Crystal Structure Of Hyperthermophilic Endo-Beta-1,4-Glucanase |