y
Basic Information | |
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Species | Brachypodium distachyon |
Cazyme ID | Bradi5g13550.1 |
Family | GH5 |
Protein Properties | Length: 559 Molecular Weight: 61497.4 Isoelectric Point: 5.9515 |
Chromosome | Chromosome/Scaffold: 5 Start: 17081998 End: 17085621 |
Description | Cellulase (glycosyl hydrolase family 5) protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH5 | 41 | 352 | 2.1e-37 |
VGADGRRVKLACASWASHLEPVAAEGLSRRDVGGIAARVAAMGFNCVRLTWPTYLATNTTLSSLPLRWSLERLGLRESVAGVRVNNPDLLDLPLIDVFRE VVSALASSNIMVILDNQMTTPGWCCSRSDGNGFFGDKYFDPEEWLKGLSAMATMFRYTKNVVGMSLRNELRGPYQNVSLWYRYMQQGAEAVHAANPNVLV ILSGLDFDNTLSFLFSKQVELSFTGKLVFEQHWYGFSDGTDWEDWNQNDACGVAVESIRTKGLFLLKQGWPLFFSEIGFDMSGTHIPDNRYLTCFISVAA EMDLDWAIWALQ |
Full Sequence |
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Protein Sequence Length: 559 Download |
MASSLTPLLV LGLLLVLLAS ARAISISLPA LPLSTASRWV VGADGRRVKL ACASWASHLE 60 PVAAEGLSRR DVGGIAARVA AMGFNCVRLT WPTYLATNTT LSSLPLRWSL ERLGLRESVA 120 GVRVNNPDLL DLPLIDVFRE VVSALASSNI MVILDNQMTT PGWCCSRSDG NGFFGDKYFD 180 PEEWLKGLSA MATMFRYTKN VVGMSLRNEL RGPYQNVSLW YRYMQQGAEA VHAANPNVLV 240 ILSGLDFDNT LSFLFSKQVE LSFTGKLVFE QHWYGFSDGT DWEDWNQNDA CGVAVESIRT 300 KGLFLLKQGW PLFFSEIGFD MSGTHIPDNR YLTCFISVAA EMDLDWAIWA LQGSYYIREG 360 ILAYDESYGL LSWDWYTARN PSFIKRINYL QSPFQGPGLP NSKKPYNAIF HPLTGLCVLV 420 KSPNSLELGP CDESNAWNYT STCELVLKHS GQCLEAKSVG DIAKLGTVSS KSCSKWQLIS 480 DSRMHVSTEL TKNGTRVCLD ASPDGVISTN QCKCLIEDPT CNPESQWFKV ILSSKGIPGE 540 ASVLQLPSLG PWPPVSSS* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
cd00161 | RICIN | 0.006 | 409 | 512 | 118 | + Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ligand binding occurs on exposed surfaces of the compact domain sturcture. | ||
smart00458 | RICIN | 0.003 | 409 | 512 | 118 | + Ricin-type beta-trefoil. Carbohydrate-binding domain formed from presumed gene triplication. | ||
pfam00150 | Cellulase | 1.0e-8 | 75 | 351 | 283 | + Cellulase (glycosyl hydrolase family 5). |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAD41089.2 | 0 | 34 | 558 | 30 | 550 | OSJNBb0011N17.6 [Oryza sativa (japonica cultivar-group)] |
EMBL | CAH67676.1 | 0 | 34 | 558 | 33 | 553 | H0510A06.1 [Oryza sativa (indica cultivar-group)] |
GenBank | EAY94563.1 | 0 | 34 | 558 | 30 | 552 | hypothetical protein OsI_16341 [Oryza sativa Indica Group] |
RefSeq | NP_001132121.1 | 0 | 35 | 558 | 31 | 554 | hypothetical protein LOC100193538 [Zea mays] |
RefSeq | XP_002446674.1 | 0 | 34 | 558 | 31 | 555 | hypothetical protein SORBIDRAFT_06g020260 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1vrx_B | 0.000001 | 35 | 279 | 8 | 245 | A Chain A, Endocellulase E1 From Acidothermus Cellulolyticus Mutant Y245g |
PDB | 1vrx_A | 0.000001 | 35 | 279 | 8 | 245 | A Chain A, Endocellulase E1 From Acidothermus Cellulolyticus Mutant Y245g |
PDB | 1ece_B | 0.000002 | 35 | 277 | 8 | 243 | A Chain A, Acidothermus Cellulolyticus Endocellulase E1 Catalytic Domain In Complex With A Cellotetraose |
PDB | 1ece_A | 0.000002 | 35 | 277 | 8 | 243 | A Chain A, Acidothermus Cellulolyticus Endocellulase E1 Catalytic Domain In Complex With A Cellotetraose |