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Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.002G188600.1 |
Family | GH5 |
Protein Properties | Length: 564 Molecular Weight: 62824.9 Isoelectric Point: 6.9859 |
Chromosome | Chromosome/Scaffold: 02 Start: 50782382 End: 50785382 |
Description | Cellulase (glycosyl hydrolase family 5) protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH5 | 38 | 349 | 3.80032e-42 |
IVDEEGRRVKLACVNWVSHLEPVVAEGLSKQPMDMIAKRIVTMGFNCVRFTWPLFLITNDSLASITVRQSFQRLGLLESIAGIQSNNPSIIDVSLIKAYQ AVVSSLGKNDVMVILDNHLSKPGWCCSNFDGNGFFGDQYFNPDLWITGLTRMATLFNGVTHVVGMSLRNELRGPKQNVNDWYRYMQKGAEAVHSANPDVL VILSGLSYDSDLSFIQNRPVQLSFSGKLVFEVHWYGFSDGQAWVTGNPNQVCGRVAKDMMRRSGFLVDQGYPLFVSEYGVDQRGTNVNDNRYLNCFLGVA AELDLDWALWTL |
Full Sequence |
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Protein Sequence Length: 564 Download |
MGSFISSSIL LLFLLFPTII QHAKPAMSLP LSTNSRWIVD EEGRRVKLAC VNWVSHLEPV 60 VAEGLSKQPM DMIAKRIVTM GFNCVRFTWP LFLITNDSLA SITVRQSFQR LGLLESIAGI 120 QSNNPSIIDV SLIKAYQAVV SSLGKNDVMV ILDNHLSKPG WCCSNFDGNG FFGDQYFNPD 180 LWITGLTRMA TLFNGVTHVV GMSLRNELRG PKQNVNDWYR YMQKGAEAVH SANPDVLVIL 240 SGLSYDSDLS FIQNRPVQLS FSGKLVFEVH WYGFSDGQAW VTGNPNQVCG RVAKDMMRRS 300 GFLVDQGYPL FVSEYGVDQR GTNVNDNRYL NCFLGVAAEL DLDWALWTLV GSYYLREGVI 360 GLNEYYGVLN YNWCETRNSS FIERISALQS PFRGPGLSET KLHKVIFHPS TGLCVIRKSF 420 LDPLCLGPCA DSESWSYSSD KTLVVKGTYF CLQADESGTL VKLGIFCSDS NSKWEMIADS 480 KMHLSSKLRN GKSICLDVDS SNAIVTNSCK CISKDNTCDP ASQWFKLVDS TRSRSEERSF 540 LHFDSIFDLP GKGFLSNLMV GSI* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
smart00458 | RICIN | 0.0002 | 406 | 524 | 126 | + Ricin-type beta-trefoil. Carbohydrate-binding domain formed from presumed gene triplication. | ||
cd00161 | RICIN | 2.0e-5 | 404 | 516 | 124 | + Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ligand binding occurs on exposed surfaces of the compact domain sturcture. | ||
pfam00150 | Cellulase | 5.0e-15 | 71 | 349 | 286 | + Cellulase (glycosyl hydrolase family 5). |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_172772.2 | 0 | 19 | 547 | 23 | 552 | glycosyl hydrolase family 5 protein / cellulase family protein [Arabidopsis thaliana] |
RefSeq | XP_002285424.1 | 0 | 24 | 551 | 22 | 547 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002312657.1 | 0 | 24 | 555 | 5 | 537 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002315653.1 | 0 | 27 | 538 | 1 | 512 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002515055.1 | 0 | 28 | 555 | 31 | 559 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1vrx_B | 0.000000000006 | 33 | 348 | 8 | 320 | A Chain A, Endocellulase E1 From Acidothermus Cellulolyticus Mutant Y245g |
PDB | 1vrx_A | 0.000000000006 | 33 | 348 | 8 | 320 | A Chain A, Endocellulase E1 From Acidothermus Cellulolyticus Mutant Y245g |
PDB | 1ece_B | 0.00000000005 | 33 | 348 | 8 | 320 | A Chain A, Acidothermus Cellulolyticus Endocellulase E1 Catalytic Domain In Complex With A Cellotetraose |
PDB | 1ece_A | 0.00000000005 | 33 | 348 | 8 | 320 | A Chain A, Acidothermus Cellulolyticus Endocellulase E1 Catalytic Domain In Complex With A Cellotetraose |
PDB | 4dm1_C | 0.0005 | 38 | 273 | 20 | 267 | A Chain A, Contribution Of Disulfide Bond Toward Thermostability In Hyperthermostable Endocellulase |