y
Basic Information | |
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Species | Carica papaya |
Cazyme ID | evm.model.supercontig_33.67 |
Family | GH5 |
Protein Properties | Length: 517 Molecular Weight: 58125.9 Isoelectric Point: 6.243 |
Chromosome | Chromosome/Scaffold: 33 Start: 631583 End: 634239 |
Description | Cellulase (glycosyl hydrolase family 5) protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH5 | 16 | 326 | 2.9e-38 |
XDEKGQRVKLACVNWVAHMEPMVAEGLSKRPMDLISKTIVSLGFNCVRLTWPTFLVTDDSLASLTVRQSFQKLGMFESIAGIQANNPSIIDLPLIKAFQT LVLNLGDNKLMVILDNHISKPGWCCSNTDGNGFFGDQYFNPDVWIIGLTRIATMFNDVSTVVGMSLRNELRGLRQNVNDWYRYMIVGAESVHKVNPNALV ILSGLNYDTDLSFVRDQALNLTFTKKLVFEWHWYGFSDGSAWENGNPNQVCGRVMSNMKSTSEFLLDQGWPLFVSEFGADLRGTNVNDNRYLNCFLGVAA YLDLDWALWTL |
Full Sequence |
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Protein Sequence Length: 517 Download |
MRDSSFPALS LTHXXXDEKG QRVKLACVNW VAHMEPMVAE GLSKRPMDLI SKTIVSLGFN 60 CVRLTWPTFL VTDDSLASLT VRQSFQKLGM FESIAGIQAN NPSIIDLPLI KAFQTLVLNL 120 GDNKLMVILD NHISKPGWCC SNTDGNGFFG DQYFNPDVWI IGLTRIATMF NDVSTVVGMS 180 LRNELRGLRQ NVNDWYRYMI VGAESVHKVN PNALVILSGL NYDTDLSFVR DQALNLTFTK 240 KLVFEWHWYG FSDGSAWENG NPNQVCGRVM SNMKSTSEFL LDQGWPLFVS EFGADLRGTN 300 VNDNRYLNCF LGVAAYLDLD WALWTLVGSY YLREGAPGEN EYFGLLDWNW HDIRNSNFLQ 360 KISAIQIPFQ GPGLSEKNKH KIIFHPSTGL CILRKSLFGP LILGPCTKSE GWSYTSQQII 420 SLMETLFCLR ADKLEKPVEL SIVCIDSKSK WELISDSKMH FASKLSNETS ICLDVDSTNT 480 IVTNNCKCLT SDNKCDPASQ WFKLVDSTRS FSPLLL* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
smart00458 | RICIN | 0.009 | 383 | 486 | 113 | + Ricin-type beta-trefoil. Carbohydrate-binding domain formed from presumed gene triplication. | ||
pfam00150 | Cellulase | 5.0e-11 | 52 | 326 | 283 | + Cellulase (glycosyl hydrolase family 5). |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EEE61202.1 | 0 | 17 | 512 | 40 | 550 | hypothetical protein OsJ_15212 [Oryza sativa Japonica Group] |
RefSeq | XP_002285424.1 | 0 | 5 | 515 | 26 | 537 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002312657.1 | 0 | 4 | 514 | 8 | 518 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002315653.1 | 0 | 17 | 510 | 14 | 507 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002515055.1 | 0 | 4 | 510 | 30 | 536 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1vrx_B | 0.0000002 | 17 | 299 | 15 | 290 | A Chain A, Endocellulase E1 From Acidothermus Cellulolyticus Mutant Y245g |
PDB | 1vrx_A | 0.0000002 | 17 | 299 | 15 | 290 | A Chain A, Endocellulase E1 From Acidothermus Cellulolyticus Mutant Y245g |
PDB | 1ece_B | 0.0000008 | 17 | 299 | 15 | 290 | A Chain A, Acidothermus Cellulolyticus Endocellulase E1 Catalytic Domain In Complex With A Cellotetraose |
PDB | 1ece_A | 0.0000008 | 17 | 299 | 15 | 290 | A Chain A, Acidothermus Cellulolyticus Endocellulase E1 Catalytic Domain In Complex With A Cellotetraose |
PDB | 4dm1_C | 0.00001 | 23 | 250 | 28 | 267 | A Chain A, Contribution Of Disulfide Bond Toward Thermostability In Hyperthermostable Endocellulase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
CB290890 | 269 | 18 | 286 | 0 |
DY282456 | 268 | 17 | 284 | 0 |
FN750530 | 266 | 135 | 400 | 0 |
DY977776 | 290 | 39 | 328 | 0 |
FN750530 | 66 | 401 | 466 | 0.0005 |
Sequence Alignments (This image is cropped. Click for full image.) |
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