y
Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.010G049800.1 |
Family | GH5 |
Protein Properties | Length: 440 Molecular Weight: 49611.1 Isoelectric Point: 7.7236 |
Chromosome | Chromosome/Scaffold: 10 Start: 8051385 End: 8053513 |
Description | Cellulase (glycosyl hydrolase family 5) protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH5 | 19 | 330 | 8.40779e-45 |
IVDENGQRVKLACVNWVSHLEVMVAEGLSKQPMDGIAKRILSMGFNCVRLTWPVFLVTNDTLGSLTVRQSLQSHGLLESISGIQANNPSIIDLSLLDVYQ AVVSSLGNNNVMVILDNHISKPGWCCSNSDGNGFFGDQYFDPDLWITGLTRMASMFKGVPNVVGMSLRNELRGPKQNVNDWYRYMQKGAEAVHSANPDVI VILSGLNYDKDLSFLRNRPVHLTFSGKIVFEVHWYGFTDGEAWKSGNSNQVCGRVVDNMMRVSGFLLDQGWPLFVSEFGVDQRGTNVNDNRYLGCFLSVA AELDLDWALWTL |
Full Sequence |
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Protein Sequence Length: 440 Download |
MIPQKQVMAL PLSTDSRWIV DENGQRVKLA CVNWVSHLEV MVAEGLSKQP MDGIAKRILS 60 MGFNCVRLTW PVFLVTNDTL GSLTVRQSLQ SHGLLESISG IQANNPSIID LSLLDVYQAV 120 VSSLGNNNVM VILDNHISKP GWCCSNSDGN GFFGDQYFDP DLWITGLTRM ASMFKGVPNV 180 VGMSLRNELR GPKQNVNDWY RYMQKGAEAV HSANPDVIVI LSGLNYDKDL SFLRNRPVHL 240 TFSGKIVFEV HWYGFTDGEA WKSGNSNQVC GRVVDNMMRV SGFLLDQGWP LFVSEFGVDQ 300 RGTNVNDNRY LGCFLSVAAE LDLDWALWTL VGSYYLRQGV IGMNEYYGVL NWNWREVRNS 360 TFLQLISALQ SPFRGIAFVT SSLFISSSNM NLMLLIYSIV FYSQSLRLCL LEICFSLYKL 420 TVNKKLIYKS SWFFYSKNP* 480 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00150 | Cellulase | 6.0e-14 | 20 | 330 | 320 | + Cellulase (glycosyl hydrolase family 5). |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAD31066.1 | 0 | 8 | 375 | 1 | 369 | AC007357_15 F3F19.15 [Arabidopsis thaliana] |
RefSeq | XP_002285424.1 | 0 | 5 | 433 | 22 | 448 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002312657.1 | 0 | 1 | 375 | 1 | 375 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002315653.1 | 0 | 8 | 375 | 1 | 368 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002515055.1 | 0 | 3 | 375 | 25 | 397 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1vrx_B | 0.00000000000006 | 14 | 329 | 8 | 320 | A Chain A, Endocellulase E1 From Acidothermus Cellulolyticus Mutant Y245g |
PDB | 1vrx_A | 0.00000000000006 | 14 | 329 | 8 | 320 | A Chain A, Endocellulase E1 From Acidothermus Cellulolyticus Mutant Y245g |
PDB | 1ece_B | 0.0000000000003 | 14 | 329 | 8 | 320 | A Chain A, Acidothermus Cellulolyticus Endocellulase E1 Catalytic Domain In Complex With A Cellotetraose |
PDB | 1ece_A | 0.0000000000003 | 14 | 329 | 8 | 320 | A Chain A, Acidothermus Cellulolyticus Endocellulase E1 Catalytic Domain In Complex With A Cellotetraose |
PDB | 3rjy_A | 0.002 | 99 | 336 | 66 | 301 | A Chain A, Crystal Structure Of Hyperthermophilic Endo-Beta-1,4-Glucanase In Complex With Substrate |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DY282456 | 284 | 5 | 288 | 0 |
CB290890 | 269 | 22 | 290 | 0 |
DY977776 | 290 | 43 | 332 | 0 |
DY972279 | 291 | 6 | 294 | 0 |
FC879052 | 261 | 5 | 265 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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