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Genome Details

Selected Rep_genome_ID: SW196_bin.29
Total Genomes Found: 5
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Phocaeicola
→
Species
Phocaeicola faecicola
Genomes Table
Genome ID Genome Length Completeness Contamination Country Continent Source
CGMR035876 3,308,900 96.74% 0.93% China Asia CGMR
HRGMv2_0256 3,876,025 97.38% 0.186% South Korea Asia HRGM
MGYG000000781 3,237,958 96.48% 0.19% China Asia UHGG
Rep_516 3,390,667 97.5083% 0.559702% NA NA WIS
SW196_bin.29 3,465,949 97.74% 0% NA Africa H3AfricaPhase2
Analysis Charts
CGCs
Gene Cluster ID Family Name In Labeled Family Gene Count CAZyme Count Substrate
SW196_bin.29_CGC10 CGCFAM_00001 Yes 5 1 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
SW196_bin.29_CGC46 CGCFAM_00001 Yes 6 3 pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
SW196_bin.29_CGC51 CGCFAM_00016 Yes 7 3 host glycan
SW196_bin.29_CGC52 CGCFAM_00016 Yes 6 1 host glycan
SW196_bin.29_CGC6 CGCFAM_00016 Yes 10 1 host glycan
SW196_bin.29_CGC36 CGCFAM_00017 Yes 8 4 fructan
SW196_bin.29_CGC33 CGCFAM_00025 Yes 11 5 pectin/alpha-glucan
SW196_bin.29_CGC24 CGCFAM_00051 Yes 3 1
SW196_bin.29_CGC30 CGCFAM_00129 Yes 7 4 beta-mannan
SW196_bin.29_CGC1 CGCFAM_00151 Yes 7 5
SW196_bin.29_CGC15 CGCFAM_00152 Yes 11 4
SW196_bin.29_CGC9 CGCFAM_00316 Yes 10 2
SW196_bin.29_CGC31 CGCFAM_00352 Yes 6 1
SW196_bin.29_CGC16 CGCFAM_00367 Yes 4 1
SW196_bin.29_CGC29 CGCFAM_00754 Yes 7 5
SW196_bin.29_CGC26 CGCFAM_00808 Yes 4 1
SW196_bin.29_CGC23 CGCFAM_00893 Yes 3 1
SW196_bin.29_CGC11 CGCFAM_00895 Yes 6 1
SW196_bin.29_CGC18 CGCFAM_01484 Yes 13 3
SW196_bin.29_CGC34 CGCFAM_01495 Yes 5 1
SW196_bin.29_CGC4 CGCFAM_01658 Yes 3 1
SW196_bin.29_CGC57 CGCFAM_01846 Yes 4 1
SW196_bin.29_CGC22 CGCFAM_02865 Yes 9 2
SW196_bin.29_CGC42 CGCFAM_03097 Yes 3 1
SW196_bin.29_CGC56 CGCFAM_03559 Yes 3 1
Top CAZyme Families