Cluster: SW196_bin.29_CGC11
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: SW196_bin.29
- CGC Family ID: CGCFAM_00895
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_127458 | k141_127458_9 | 8117 | 8794 | + | 9.B.104.1.5 |
| TC | k141_127458 | k141_127458_10 | 8766 | 9662 | + | 9.B.104.1.2 |
| pfam | k141_127458 | k141_127458_11 | 9685 | 10749 | + | Exo_endo_phos |
| NULL(UNKNOWN) | k141_127458 | k141_127458_12 | 10765 | 10908 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_127458 | k141_127458_13 | 10951 | 13947 | + | 2.A.6.4.3 |
| CAZyme | k141_127458 | k141_127458_14 | 13966 | 16449 | + | GH20 |
Gene ID: k141_127458_9
Type: TC
Location: 8117 - 8794 (+)
Type: TC
Location: 8117 - 8794 (+)
Gene ID: k141_127458_10
Type: TC
Location: 8766 - 9662 (+)
Type: TC
Location: 8766 - 9662 (+)
Gene ID: k141_127458_11
Type: pfam
Location: 9685 - 10749 (+)
Type: pfam
Location: 9685 - 10749 (+)
Gene ID: k141_127458_12
Type:
Location: 10765 - 10908 (+)
Type:
Location: 10765 - 10908 (+)
Gene ID: k141_127458_13
Type: TC
Location: 10951 - 13947 (+)
Type: TC
Location: 10951 - 13947 (+)
Gene ID: k141_127458_14
Type: CAZyme
Location: 13966 - 16449 (+)
Type: CAZyme
Location: 13966 - 16449 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Species
Phocaeicola faecicola
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.