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Cluster: SW196_bin.29_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_34674 k141_34674_3 1916 3673 + 3.A.2.3.3
TC k141_34674 k141_34674_4 3700 5019 + 3.A.2.3.3
pfam k141_34674 k141_34674_5 5041 5646 + ATP-synt_D
TC k141_34674 k141_34674_6 5643 7475 + 3.A.2.3.3
pfam k141_34674 k141_34674_7 7513 7932 + ATP-synt_C | ATP-synt_C
CAZyme k141_34674 k141_34674_8 8318 9988 + GT3
CAZyme k141_34674 k141_34674_9 10011 12578 + GT35
NULL(UNKNOWN) k141_34674 k141_34674_10 12740 13216 + NULL(UNKNOWN)
[View Structural Homologs]
pfam k141_34674 k141_34674_11 13396 14034 - Leu_Phe_trans
TC k141_34674 k141_34674_12 14052 16262 - 3.A.9.1.2
Gene ID: k141_34674_3
Type: TC
Location: 1916 - 3673 (+)
Gene ID: k141_34674_4
Type: TC
Location: 3700 - 5019 (+)
Gene ID: k141_34674_5
Type: pfam
Location: 5041 - 5646 (+)
Gene ID: k141_34674_6
Type: TC
Location: 5643 - 7475 (+)
Gene ID: k141_34674_7
Type: pfam
Location: 7513 - 7932 (+)
Gene ID: k141_34674_8
Type: CAZyme
Location: 8318 - 9988 (+)
Gene ID: k141_34674_9
Type: CAZyme
Location: 10011 - 12578 (+)
Gene ID: k141_34674_10
Type:
Location: 12740 - 13216 (+)
Gene ID: k141_34674_11
Type: pfam
Location: 13396 - 14034 (-)
Gene ID: k141_34674_12
Type: TC
Location: 14052 - 16262 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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