Cluster: SW196_bin.29_CGC1
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 5
- Substrate:
- Genome ID: SW196_bin.29
- CGC Family ID: CGCFAM_00151
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_219014 | k141_219014_8 | 12267 | 14759 | + | 9.B.144.1.4 |
| CAZyme | k141_219014 | k141_219014_9 | 14852 | 15610 | - | GT2 |
| CAZyme | k141_219014 | k141_219014_10 | 15603 | 16865 | - | GT4 |
| CAZyme | k141_219014 | k141_219014_11 | 16862 | 18121 | - | GT4 |
| CAZyme | k141_219014 | k141_219014_12 | 18302 | 19135 | + | GT23 |
| pfam | k141_219014 | k141_219014_13 | 19142 | 20056 | - | Glycos_transf_2 |
| CAZyme | k141_219014 | k141_219014_14 | 20083 | 21099 | - | GT94 |
Gene ID: k141_219014_8
Type: TC
Location: 12267 - 14759 (+)
Type: TC
Location: 12267 - 14759 (+)
Gene ID: k141_219014_9
Type: CAZyme
Location: 14852 - 15610 (-)
Type: CAZyme
Location: 14852 - 15610 (-)
Gene ID: k141_219014_10
Type: CAZyme
Location: 15603 - 16865 (-)
Type: CAZyme
Location: 15603 - 16865 (-)
Gene ID: k141_219014_11
Type: CAZyme
Location: 16862 - 18121 (-)
Type: CAZyme
Location: 16862 - 18121 (-)
Gene ID: k141_219014_12
Type: CAZyme
Location: 18302 - 19135 (+)
Type: CAZyme
Location: 18302 - 19135 (+)
Gene ID: k141_219014_13
Type: pfam
Location: 19142 - 20056 (-)
Type: pfam
Location: 19142 - 20056 (-)
Gene ID: k141_219014_14
Type: CAZyme
Location: 20083 - 21099 (-)
Type: CAZyme
Location: 20083 - 21099 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Species
Phocaeicola faecicola
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.