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Cluster: SW196_bin.29_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_25721 k141_25721_28 31840 33783 + GH133
CAZyme k141_25721 k141_25721_29 33800 35071 + GT4
CAZyme k141_25721 k141_25721_30 35089 36459 + GH57
pfam k141_25721 k141_25721_31 37168 37770 + UPF0029
NULL(UNKNOWN) k141_25721 k141_25721_32 37876 38856 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_25721 k141_25721_33 38919 39971 + 3.A.1.7.1
TC k141_25721 k141_25721_34 40014 40871 + 3.A.1.7.1
TC k141_25721 k141_25721_35 40888 41760 + 3.A.1.7.1
TC k141_25721 k141_25721_36 41748 42518 + 3.A.1.7.2
TC k141_25721 k141_25721_37 43050 46391 + 1.B.14.6.1
pfam k141_25721 k141_25721_38 46411 48294 + SusD_RagB | SusD-like_3
pfam k141_25721 k141_25721_39 48656 49657 + YkuD
TC k141_25721 k141_25721_40 49738 51540 + 1.A.23.1.4
Gene ID: k141_25721_28
Type: CAZyme
Location: 31840 - 33783 (+)
Gene ID: k141_25721_29
Type: CAZyme
Location: 33800 - 35071 (+)
Gene ID: k141_25721_30
Type: CAZyme
Location: 35089 - 36459 (+)
Gene ID: k141_25721_31
Type: pfam
Location: 37168 - 37770 (+)
Gene ID: k141_25721_32
Type:
Location: 37876 - 38856 (+)
Gene ID: k141_25721_33
Type: TC
Location: 38919 - 39971 (+)
Gene ID: k141_25721_34
Type: TC
Location: 40014 - 40871 (+)
Gene ID: k141_25721_35
Type: TC
Location: 40888 - 41760 (+)
Gene ID: k141_25721_36
Type: TC
Location: 41748 - 42518 (+)
Gene ID: k141_25721_37
Type: TC
Location: 43050 - 46391 (+)
Gene ID: k141_25721_38
Type: pfam
Location: 46411 - 48294 (+)
Gene ID: k141_25721_39
Type: pfam
Location: 48656 - 49657 (+)
Gene ID: k141_25721_40
Type: TC
Location: 49738 - 51540 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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