Genome Details
Selected Rep_genome_ID: SW196_bin.29
Total Genomes Found: 5
Total Genomes Found: 5
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Species
Phocaeicola faecicola
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| CGMR035876 | 3,308,900 | 96.74% | 0.93% | China | Asia | CGMR |
| HRGMv2_0256 | 3,876,025 | 97.38% | 0.186% | South Korea | Asia | HRGM |
| MGYG000000781 | 3,237,958 | 96.48% | 0.19% | China | Asia | UHGG |
| Rep_516 | 3,390,667 | 97.5083% | 0.559702% | NA | NA | WIS |
| SW196_bin.29 | 3,465,949 | 97.74% | 0% | NA | Africa | H3AfricaPhase2 |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| SW196_bin.29_CGC54 | CGCFAM_04848 | Yes | 11 | 5 | |
| SW196_bin.29_CGC13 | CGCFAM_06311 | Yes | 13 | 3 | |
| SW196_bin.29_CGC40 | CGCFAM_06649 | Yes | 7 | 1 | |
| SW196_bin.29_CGC49 | CGCFAM_10495 | Yes | 3 | 1 | |
| SW196_bin.29_CGC17 | CGCFAM_11287 | Yes | 3 | 2 | |
| SW196_bin.29_CGC41 | CGCFAM_11294 | Yes | 10 | 3 |
Top CAZyme Families