Cluster: SW196_bin.29_CGC40
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: SW196_bin.29
- CGC Family ID: CGCFAM_06649
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_202218 | k141_202218_9 | 13552 | 16656 | + | 1.B.14.6.1 |
| TC | k141_202218 | k141_202218_10 | 16675 | 18285 | + | 8.A.46.1.3 |
| CAZyme | k141_202218 | k141_202218_11 | 18356 | 19174 | + | GH16_3 |
| pfam | k141_202218 | k141_202218_12 | 19500 | 20546 | - | Acetyltransf_1 | Acetyltransf_7 | Acetyltransf_9 |
| pfam | k141_202218 | k141_202218_13 | 20543 | 21433 | - | LPG_synthase_C |
| TC | k141_202218 | k141_202218_14 | 21513 | 22208 | - | 2.A.122.1.1 |
| TC | k141_202218 | k141_202218_15 | 22189 | 22539 | - | 1.E.14.1.13 |
Gene ID: k141_202218_9
Type: TC
Location: 13552 - 16656 (+)
Type: TC
Location: 13552 - 16656 (+)
Gene ID: k141_202218_10
Type: TC
Location: 16675 - 18285 (+)
Type: TC
Location: 16675 - 18285 (+)
Gene ID: k141_202218_11
Type: CAZyme
Location: 18356 - 19174 (+)
Type: CAZyme
Location: 18356 - 19174 (+)
Gene ID: k141_202218_12
Type: pfam
Location: 19500 - 20546 (-)
Type: pfam
Location: 19500 - 20546 (-)
Gene ID: k141_202218_13
Type: pfam
Location: 20543 - 21433 (-)
Type: pfam
Location: 20543 - 21433 (-)
Gene ID: k141_202218_14
Type: TC
Location: 21513 - 22208 (-)
Type: TC
Location: 21513 - 22208 (-)
Gene ID: k141_202218_15
Type: TC
Location: 22189 - 22539 (-)
Type: TC
Location: 22189 - 22539 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Species
Phocaeicola faecicola
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.