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Cluster: SW196_bin.29_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_30101 k141_30101_55 53706 56402 + GH38
CAZyme k141_30101 k141_30101_56 56430 58019 + GH92
CAZyme k141_30101 k141_30101_57 57977 58780 + GH92
TF k141_30101 k141_30101_58 59014 60348 + HTH_8
TC k141_30101 k141_30101_59 60436 61896 - 2.A.21.9.1
pfam k141_30101 k141_30101_60 61907 63034 - KdpD
TC k141_30101 k141_30101_61 63095 64600 - 2.A.38.1.1
TC k141_30101 k141_30101_62 64860 65447 - 3.A.3.7.2
TC k141_30101 k141_30101_63 65472 67508 - 3.A.3.7.2
TC k141_30101 k141_30101_64 67601 69307 - 3.A.3.7.2
NULL(UNKNOWN) k141_30101 k141_30101_65 69462 69563 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) k141_30101 k141_30101_66 69716 69847 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_30101 k141_30101_67 69987 71279 - 2.A.115.2.14
Gene ID: k141_30101_55
Type: CAZyme
Location: 53706 - 56402 (+)
Gene ID: k141_30101_56
Type: CAZyme
Location: 56430 - 58019 (+)
Gene ID: k141_30101_57
Type: CAZyme
Location: 57977 - 58780 (+)
Gene ID: k141_30101_58
Type: TF
Location: 59014 - 60348 (+)
Gene ID: k141_30101_59
Type: TC
Location: 60436 - 61896 (-)
Gene ID: k141_30101_60
Type: pfam
Location: 61907 - 63034 (-)
Gene ID: k141_30101_61
Type: TC
Location: 63095 - 64600 (-)
Gene ID: k141_30101_62
Type: TC
Location: 64860 - 65447 (-)
Gene ID: k141_30101_63
Type: TC
Location: 65472 - 67508 (-)
Gene ID: k141_30101_64
Type: TC
Location: 67601 - 69307 (-)
Gene ID: k141_30101_65
Type:
Location: 69462 - 69563 (-)
Gene ID: k141_30101_66
Type:
Location: 69716 - 69847 (+)
Gene ID: k141_30101_67
Type: TC
Location: 69987 - 71279 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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