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Cluster: SW196_bin.29_CGC41

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_124653 k141_124653_17 20493 22946 - GH127 | GH92
CAZyme k141_124653 k141_124653_18 22943 24475 - GH92
TF k141_124653 k141_124653_19 24581 25456 + HTH_AraC
TC k141_124653 k141_124653_20 25529 27214 - 8.A.46.1.6
TC k141_124653 k141_124653_21 27234 30404 - 1.B.14.6.1
pfam k141_124653 k141_124653_22 31021 32319 - OEP | OEP
TC k141_124653 k141_124653_23 32389 35448 - 2.A.6.2.37
pfam k141_124653 k141_124653_24 35613 36722 - HlyD_3 | Biotin_lipoyl_2 | HlyD_D23
TF k141_124653 k141_124653_25 37026 37907 + HTH_AraC
CAZyme k141_124653 k141_124653_26 38332 39525 - CE1
Gene ID: k141_124653_17
Type: CAZyme
Location: 20493 - 22946 (-)
Gene ID: k141_124653_18
Type: CAZyme
Location: 22943 - 24475 (-)
Gene ID: k141_124653_19
Type: TF
Location: 24581 - 25456 (+)
Gene ID: k141_124653_20
Type: TC
Location: 25529 - 27214 (-)
Gene ID: k141_124653_21
Type: TC
Location: 27234 - 30404 (-)
Gene ID: k141_124653_22
Type: pfam
Location: 31021 - 32319 (-)
Gene ID: k141_124653_23
Type: TC
Location: 32389 - 35448 (-)
Gene ID: k141_124653_24
Type: pfam
Location: 35613 - 36722 (-)
Gene ID: k141_124653_25
Type: TF
Location: 37026 - 37907 (+)
Gene ID: k141_124653_26
Type: CAZyme
Location: 38332 - 39525 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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