Cluster: SW196_bin.29_CGC29
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 5
- Substrate:
- Genome ID: SW196_bin.29
- CGC Family ID: CGCFAM_00754
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_172607 | k141_172607_85 | 116341 | 117309 | + | GH5_2 |
| CAZyme | k141_172607 | k141_172607_86 | 117339 | 118466 | + | CE2 |
| CAZyme | k141_172607 | k141_172607_87 | 118496 | 119920 | + | CE20 |
| CAZyme | k141_172607 | k141_172607_88 | 120053 | 122269 | - | GH36 |
| TF | k141_172607 | k141_172607_89 | 122559 | 123449 | + | HTH_AraC | HTH_AraC |
| CAZyme | k141_172607 | k141_172607_90 | 123686 | 124993 | + | GH5_7 |
| TC | k141_172607 | k141_172607_91 | 125207 | 128479 | + | 1.B.14.6.1 |
Gene ID: k141_172607_85
Type: CAZyme
Location: 116341 - 117309 (+)
Type: CAZyme
Location: 116341 - 117309 (+)
Gene ID: k141_172607_86
Type: CAZyme
Location: 117339 - 118466 (+)
Type: CAZyme
Location: 117339 - 118466 (+)
Gene ID: k141_172607_87
Type: CAZyme
Location: 118496 - 119920 (+)
Type: CAZyme
Location: 118496 - 119920 (+)
Gene ID: k141_172607_88
Type: CAZyme
Location: 120053 - 122269 (-)
Type: CAZyme
Location: 120053 - 122269 (-)
Gene ID: k141_172607_89
Type: TF
Location: 122559 - 123449 (+)
Type: TF
Location: 122559 - 123449 (+)
Gene ID: k141_172607_90
Type: CAZyme
Location: 123686 - 124993 (+)
Type: CAZyme
Location: 123686 - 124993 (+)
Gene ID: k141_172607_91
Type: TC
Location: 125207 - 128479 (+)
Type: TC
Location: 125207 - 128479 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Species
Phocaeicola faecicola
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.