Cluster: SW196_bin.29_CGC46
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate: pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
- Genome ID: SW196_bin.29
- CGC Family ID: CGCFAM_00001
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_207992 | k141_207992_44 | 47728 | 50940 | + | 1.B.14.6.1 |
| pfam | k141_207992 | k141_207992_45 | 50971 | 52824 | + | SusD_RagB | SusD-like_2 | SusD-like_3 |
| CAZyme | k141_207992 | k141_207992_46 | 52958 | 54595 | + | GH18 |
| CAZyme | k141_207992 | k141_207992_47 | 54700 | 57027 | + | GH20 |
| CAZyme | k141_207992 | k141_207992_48 | 57055 | 60657 | + | GH2 |
| TC | k141_207992 | k141_207992_49 | 61047 | 64133 | + | 1.B.14.6.1 |
Gene ID: k141_207992_44
Type: TC
Location: 47728 - 50940 (+)
Type: TC
Location: 47728 - 50940 (+)
Gene ID: k141_207992_45
Type: pfam
Location: 50971 - 52824 (+)
Type: pfam
Location: 50971 - 52824 (+)
Gene ID: k141_207992_46
Type: CAZyme
Location: 52958 - 54595 (+)
Type: CAZyme
Location: 52958 - 54595 (+)
Gene ID: k141_207992_47
Type: CAZyme
Location: 54700 - 57027 (+)
Type: CAZyme
Location: 54700 - 57027 (+)
Gene ID: k141_207992_48
Type: CAZyme
Location: 57055 - 60657 (+)
Type: CAZyme
Location: 57055 - 60657 (+)
Gene ID: k141_207992_49
Type: TC
Location: 61047 - 64133 (+)
Type: TC
Location: 61047 - 64133 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Species
Phocaeicola faecicola
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.