Genome Details
Selected Rep_genome_ID: SW171_30
Total Genomes Found: 7
Total Genomes Found: 7
Read Mapping - JBrowse
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnospira
Species
Lachnospira hominis
Genomes Table
| Genome ID | Genome Length | Completeness | Contamination | Country | Continent | Source |
|---|---|---|---|---|---|---|
| A72.CMAG_7 | 2,424,278 | 97.32% | 0.67% | China(Inner Mongolia) | Asia | IMGG |
| CGMR036944 | 2,507,623 | 97.99% | 0.22% | China | Asia | CGMR |
| HRGMv2_2035 | 2,647,203 | 98.65% | 0% | Luxembourg | Europe | HRGM |
| MGYG000004317 | 2,482,422 | 98.66% | 0.02% | Israel | Asia | UHGG |
| Rep_2374 | 2,866,128 | 98.6577% | 0.671141% | NA | NA | WIS |
| SPMP103_bin.34 | 2,680,537 | 96.19% | 2.01% | Singapore | Asia | SPMP |
| SW171_30 | 2,664,152 | 98.66% | 0% | NA | Africa | H3AfricaPhase2 |
Analysis Charts
CGCs
| Gene Cluster ID | Family Name | In Labeled Family | Gene Count | CAZyme Count | Substrate |
|---|---|---|---|---|---|
| SW171_30_CGC8 | CGCFAM_00009 | Yes | 10 | 5 | |
| SW171_30_CGC20 | CGCFAM_00022 | Yes | 4 | 2 | |
| SW171_30_CGC14 | CGCFAM_00056 | Yes | 4 | 1 | |
| SW171_30_CGC25 | CGCFAM_00637 | Yes | 4 | 1 | |
| SW171_30_CGC22 | CGCFAM_00738 | Yes | 4 | 1 | |
| SW171_30_CGC7 | CGCFAM_00757 | Yes | 4 | 1 | |
| SW171_30_CGC30 | CGCFAM_00996 | Yes | 4 | 1 | |
| SW171_30_CGC1 | CGCFAM_01043 | Yes | 4 | 1 | |
| SW171_30_CGC33 | CGCFAM_01526 | Yes | 3 | 1 | |
| SW171_30_CGC27 | CGCFAM_01575 | Yes | 7 | 1 | |
| SW171_30_CGC2 | CGCFAM_02080 | Yes | 5 | 1 | |
| SW171_30_CGC10 | CGCFAM_02112 | Yes | 3 | 1 | |
| SW171_30_CGC31 | CGCFAM_10342 | Yes | 4 | 1 |
Top CAZyme Families