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Cluster: SW171_30_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_72389 k141_72389_33 38177 38866 + 9.B.18.1.3
CAZyme k141_72389 k141_72389_34 38880 39905 + GT2
TC k141_72389 k141_72389_35 39914 41782 + 9.B.18.2.1
CAZyme k141_72389 k141_72389_36 41813 42922 + GT4
CAZyme k141_72389 k141_72389_37 42935 43861 + GT2
TC k141_72389 k141_72389_38 43918 44715 + 3.A.1.104.1
TC k141_72389 k141_72389_39 44755 45990 + 3.A.1.103.6
pfam k141_72389 k141_72389_40 46028 47296 + MetW | Methyltransf_11 | Methyltransf_12 | Methyltransf_23 | Methyltransf_25 | Methyltransf_31
CAZyme k141_72389 k141_72389_41 47333 48541 + GT4
CAZyme k141_72389 k141_72389_42 48525 49733 + GT2
Gene ID: k141_72389_33
Type: TC
Location: 38177 - 38866 (+)
Gene ID: k141_72389_34
Type: CAZyme
Location: 38880 - 39905 (+)
Gene ID: k141_72389_35
Type: TC
Location: 39914 - 41782 (+)
Gene ID: k141_72389_36
Type: CAZyme
Location: 41813 - 42922 (+)
Gene ID: k141_72389_37
Type: CAZyme
Location: 42935 - 43861 (+)
Gene ID: k141_72389_38
Type: TC
Location: 43918 - 44715 (+)
Gene ID: k141_72389_39
Type: TC
Location: 44755 - 45990 (+)
Gene ID: k141_72389_40
Type: pfam
Location: 46028 - 47296 (+)
Gene ID: k141_72389_41
Type: CAZyme
Location: 47333 - 48541 (+)
Gene ID: k141_72389_42
Type: CAZyme
Location: 48525 - 49733 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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