Cluster: SW171_30_CGC27
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: SW171_30
- CGC Family ID: CGCFAM_01575
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_86012 | k141_86012_6 | 3620 | 4420 | - | 1.A.8.3.1 |
| CAZyme | k141_86012 | k141_86012_7 | 4528 | 5550 | + | GH25 |
| TC | k141_86012 | k141_86012_8 | 5555 | 6082 | - | 9.B.156.3.1 |
| TC | k141_86012 | k141_86012_9 | 6079 | 6687 | - | 9.B.156.3.1 |
| STP | k141_86012 | k141_86012_10 | 6746 | 7708 | - | NUDIX |
| pfam | k141_86012 | k141_86012_11 | 7732 | 8688 | - | cobW | DUF1980_C |
| TC | k141_86012 | k141_86012_12 | 8703 | 9797 | - | 9.B.10.1.1 |
Gene ID: k141_86012_6
Type: TC
Location: 3620 - 4420 (-)
Type: TC
Location: 3620 - 4420 (-)
Gene ID: k141_86012_7
Type: CAZyme
Location: 4528 - 5550 (+)
Type: CAZyme
Location: 4528 - 5550 (+)
Gene ID: k141_86012_8
Type: TC
Location: 5555 - 6082 (-)
Type: TC
Location: 5555 - 6082 (-)
Gene ID: k141_86012_9
Type: TC
Location: 6079 - 6687 (-)
Type: TC
Location: 6079 - 6687 (-)
Gene ID: k141_86012_10
Type: STP
Location: 6746 - 7708 (-)
Type: STP
Location: 6746 - 7708 (-)
Gene ID: k141_86012_11
Type: pfam
Location: 7732 - 8688 (-)
Type: pfam
Location: 7732 - 8688 (-)
Gene ID: k141_86012_12
Type: TC
Location: 8703 - 9797 (-)
Type: TC
Location: 8703 - 9797 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnospira
Species
Lachnospira hominis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_86012_10 | vegan > omnivore | 1.68532 | 0.00770 |
| k141_86012_10 | vegetarian > omnivore | 1.44774 | 0.01456 |