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Cluster: SW171_30_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_112543 k141_112543_144 150041 150937 - 1.A.23.2.2
CAZyme k141_112543 k141_112543_145 150938 153322 - GH13_9
peptidase k141_112543 k141_112543_146 153322 154170 - S09.UPW
pfam k141_112543 k141_112543_147 154189 155421 - DUF1015
TC k141_112543 k141_112543_148 155465 157039 - 1.B.52.2.1
Gene ID: k141_112543_144
Type: TC
Location: 150041 - 150937 (-)
Gene ID: k141_112543_145
Type: CAZyme
Location: 150938 - 153322 (-)
Gene ID: k141_112543_146
Type: peptidase
Location: 153322 - 154170 (-)
Gene ID: k141_112543_147
Type: pfam
Location: 154189 - 155421 (-)
Gene ID: k141_112543_148
Type: TC
Location: 155465 - 157039 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_112543_144 vegan > omnivore 1.73099 0.00770
k141_112543_145 vegan > omnivore 2.51459 0.00770
k141_112543_145 vegetarian > omnivore 1.38063 0.01456
k141_112543_146 vegan > omnivore 2.82666 0.00770
k141_112543_146 vegetarian > omnivore 1.70706 0.01456
k141_112543_147 vegan > omnivore 1.77414 0.00770
k141_112543_147 vegetarian > omnivore 1.87076 0.01188
k141_112543_148 vegan > omnivore 1.05533 0.00770

🧭 Explore Read Mapping of CGC

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