Cluster: SW171_30_CGC33
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: SW171_30
- CGC Family ID: CGCFAM_01526
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_82060 | k141_82060_20 | 22710 | 24644 | + | GH25 |
| pfam | k141_82060 | k141_82060_21 | 24675 | 26000 | + | UPF0004 | Radical_SAM | TRAM_2 |
| TC | k141_82060 | k141_82060_22 | 26023 | 26571 | + | 4.F.1.1.7 |
Gene ID: k141_82060_20
Type: CAZyme
Location: 22710 - 24644 (+)
Type: CAZyme
Location: 22710 - 24644 (+)
Gene ID: k141_82060_21
Type: pfam
Location: 24675 - 26000 (+)
Type: pfam
Location: 24675 - 26000 (+)
Gene ID: k141_82060_22
Type: TC
Location: 26023 - 26571 (+)
Type: TC
Location: 26023 - 26571 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lachnospira
Species
Lachnospira hominis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_82060_21 | vegan > omnivore | 1.90962 | 0.00770 |
| k141_82060_21 | vegetarian > omnivore | 1.32662 | 0.01456 |